| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1750 |
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| Symbol | |
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| ID | 8447352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1917361 |
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| End bp | 1918074 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645040876 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_003201129 |
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| Protein GI | 258651973 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00428028 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0347073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACAT TCGATTCATC TGATTTATTC GATTCACCCG ATTCCAGGGC ATTCGAAGTG
GACACCGCGA TCTTCGACGT CGACGGCACG CTGGTGGACA CCAACTACCA GCACGCGCTG
GCCTGGTACC GCGCCTTTCG CCGGTACGAC CTGACCATTC CGTTGTGGCA CATCCACCGG
GCCATCGGAA TGGGCGGCGA TCAGCTCATC CCGCACGTGG CCGGCGAGGA CGTCGCCCGG
CGGCACGCCG AGGACCTCGA TCAGGCGTGG ACCGAGGAAT TCCGCGCGAT GGTGGACGAG
GTGCAGCCGT TCGAGGGGGC CCGGGAATTG CTGGCCGAGG TGAAGGAGCG CGGCTTTCGC
CTGGTGCTGG CCAGCTCGGG CAAACAGGAG TTCGTCACCC GCTTCCTCGA GCTGATCGAC
GGCCGGTCGA TCGCCGACGC CTGGACCACC TCCGAGGACG CCGAGGAGAG CAAACCGGCG
CCCGACCTGT TGCAGGTGGC GCTGGCCAAG GTGTCCGGGG CGCGCGGGCT GATGATCGGC
GACTCGACCT GGGACTGCGC CGCCGCGAAC AGATTGTCGG TGCCCACGCT GGCGGTGCGG
ACGGGCGGCT TCTCCACCGA AGAACTCCGG GCGGCCGGAG CGATCGGTGT CTTCGACTCG
CTGGTGGATC TGCGGCGGTC GCTGGACCGA ACGCCGTTGG CGCGTCCGCG CTGA
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| Protein sequence | MVTFDSSDLF DSPDSRAFEV DTAIFDVDGT LVDTNYQHAL AWYRAFRRYD LTIPLWHIHR
AIGMGGDQLI PHVAGEDVAR RHAEDLDQAW TEEFRAMVDE VQPFEGAREL LAEVKERGFR
LVLASSGKQE FVTRFLELID GRSIADAWTT SEDAEESKPA PDLLQVALAK VSGARGLMIG
DSTWDCAAAN RLSVPTLAVR TGGFSTEELR AAGAIGVFDS LVDLRRSLDR TPLARPR
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