| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2403 |
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| Symbol | |
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| ID | 4252974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2862317 |
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| End bp | 2863063 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119035 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_734531 |
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| Protein GI | 113970738 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000854479 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGT CAGAGAGTCA TTCAACCCAA CGAAAATATG ATTTAGTGAT TTTTGATTGG
GATGGCACGT TAATGGATTC CATCGGCAAG ATTATTGTTT GCATTGAGAA TATGGCTAGG
GCGCTGGCGC TACCAGTGCC TGCTGAGGCG GATATTCGCA ATGTGATTGG CTTGTCGATG
ACGCAGGCGT TACAGGTGTT ATTTCCCATA GGTTTGACTT CTGTGCCGCC GCTTAACGGA
TGTGCAAGCA GGGCGGCACA AGCGGGGGCA ACTCAAGCGC TTGTTGGCAC CGATGATTGC
TATATAAAGA TGCGCGCCGA GTTTAAGGCG CAGTATTTGC ACCTTGATAC CACGCCAACG
CCGATTTTTA ACCAAGCCCC CCAACTACTC GAATCATTAT CAACAGCAGG ATATCAACTT
GCTGTCGCGA CGGGTAAGGC GAAAGCAGGC TTAGTGCGCG TGTGGGAGCA ATCCGGCTTA
GGTCACTATT TTATTGCTTC TCGCTGCGCC GATGAGGCGC AGAGTAAACC TCACCCAGAA
ATGATCTTAA GTTTGCTGCA GGAGTTAGGT ATTCCGCCTG AACGAGCCTT GATGGTTGGA
GACTCTTTGT TGGATTTAAC CATGGCGGCG AATGCGGGTA TCGACGGTGT GGGTGTCACT
TACGGCGCTC ATAGTGAAGA AATGCTCCAG CAAGCCAATC CCATCGCCTT AATTGATTCC
CCTGAAAAAC TCTTGCTGCA TTTATAG
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| Protein sequence | MKVSESHSTQ RKYDLVIFDW DGTLMDSIGK IIVCIENMAR ALALPVPAEA DIRNVIGLSM
TQALQVLFPI GLTSVPPLNG CASRAAQAGA TQALVGTDDC YIKMRAEFKA QYLHLDTTPT
PIFNQAPQLL ESLSTAGYQL AVATGKAKAG LVRVWEQSGL GHYFIASRCA DEAQSKPHPE
MILSLLQELG IPPERALMVG DSLLDLTMAA NAGIDGVGVT YGAHSEEMLQ QANPIALIDS
PEKLLLHL
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