| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5583 |
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| Symbol | |
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| ID | 4314520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 10736 |
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| End bp | 11410 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153425 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_777464 |
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| Protein GI | 115360327 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTG AAACGTCATT TCTGTTCGAT CTCGACGGCA CGCTCGTCGA CAGCGTCTAT
CAGCACGTGC TCGCGTGGAA GGAAGCGCTC GATGCCGAGG GCATCGAGCT GTCGGTGTGG
CGCATCCACC GCAAGATCGG GATGAGCGGC GGCCTGTTCC TGAACCAGCT GCTGCGCGAG
ACGGCCGGCG ACATCGACGC CGAGCGCGTC GAGCGGCTCG CGCGGCTGCA TGCGGCCGCG
TACCAGCGGT TGCGCGCGCA GGTCCGGCCG CTGCCGGGTG CGCGCGAGCT GCTGGGCGCG
CTGACGAATG CCGGCATTAG CTGGGCGATC GCGACCAGCG GGCGGATGGA AACCGCCGCG
ATCAATCTGG AGGCGCTCGG CGTCGATCCG GAGAAGAACG TGGTCGTCAC GCGCGACCAG
GTGAAGTACG CGAAGCCGGA TCCCGACCTG TTCCTGACCG CCGCCGCGAA ACTGAACGTG
CCGATCGAAC ATACGGTCGT GGTCGGCGAC AGCATCTGGG ACATGCTCGC CGCGAGCCGC
TGCCGGGCGC TTGGCGTCGG GCTGCTGTCG GGCGGTTACG GCAGCGACGA GCTCGAACGC
GCGGGCGCGC TGCGCGTGTA TGACGATCCG GCGGATCTGC TGTGGCATCT GGATGAGATC
GCGGCGCGGC CGTAA
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| Protein sequence | MRIETSFLFD LDGTLVDSVY QHVLAWKEAL DAEGIELSVW RIHRKIGMSG GLFLNQLLRE
TAGDIDAERV ERLARLHAAA YQRLRAQVRP LPGARELLGA LTNAGISWAI ATSGRMETAA
INLEALGVDP EKNVVVTRDQ VKYAKPDPDL FLTAAAKLNV PIEHTVVVGD SIWDMLAASR
CRALGVGLLS GGYGSDELER AGALRVYDDP ADLLWHLDEI AARP
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