| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0471 |
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| Symbol | |
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| ID | 8366877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 601797 |
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| End bp | 602429 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644982892 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003140595 |
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| Protein GI | 256819316 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAACA ACTATATTAT CTTTGATATG GACGGGGTGC TACTGGACAG TGAACCGATG
CACCAAGAGA TTATTTATGA GACTTTTCAG CTGAAAGGCA TTCCGTTTGA CAAGGCATAT
ATACAAACTC TCACGGGAAT GTCGGCTTTT CCGATGTGGG AAAAGGTAAA ATGCGATGCC
CACCGAACAG AAAGTGTAGA GGAGCTAATG CAGTTTCACC GTGATTACTT TTTCAAACGA
TTACCCGAAG TGAAAGTTCC CTTAGTACCT CACGTAAAAG AAGTGTTAGA GAAGTTTAAG
AATGAAGCAA AGCACTTATC ATTAGCTTCC TCTTCCGGAC GCAAACTCAT CGATATTTTT
ACTCAGCAAA CAAATATAGC ACACTATTTT GAAGTAATGA TGAGCGGAGA TGATGTGCAG
TACAGCAAAC CTAATCCTGA CATATTCCTA AAAGTAGCCC AATGGTACCA CTTGCCAGCA
ACACAATTTA CAGTGATAGA GGACAGTACC AATGGCGTGA AAGCTGCCAA AAGTGCTAAT
ATGCAGTGTG TGGGCTTCCA GAATCCCCTT TCAGGCGGAC AAGATTTAAG TCAAGCTGAC
CTACTTATCC ATTCAATGCA AGAACTTTTA TGA
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| Protein sequence | MTNNYIIFDM DGVLLDSEPM HQEIIYETFQ LKGIPFDKAY IQTLTGMSAF PMWEKVKCDA
HRTESVEELM QFHRDYFFKR LPEVKVPLVP HVKEVLEKFK NEAKHLSLAS SSGRKLIDIF
TQQTNIAHYF EVMMSGDDVQ YSKPNPDIFL KVAQWYHLPA TQFTVIEDST NGVKAAKSAN
MQCVGFQNPL SGGQDLSQAD LLIHSMQELL
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