Gene Rleg_3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3747 
Symbol 
ID8014581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3797950 
End bp3798639 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content60% 
IMG OID644826310 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002977529 
Protein GI241206433 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.422409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG CTGAAACACG GCTGGTGATC TTCGATTGCG ATGGCGTACT CGTCGACAGC 
GAGCCGATCT CGATCAGCGT GCTCGTCGGG GCAATGAACG ATCTCGGCGT CTCGATCACC
GAGGACCAGG CCTATGAGCG TTTTCTCGGC CGCAGCCTGT CGACCCTCAT CGATACGCTG
GAAACCGAAT TCAACGTCCA TGCCGACGAG GAATTCCTCG AGCGTATCCG CATCGAACTC
TACGCTCGTT TTCGCACGGA ACTGAAGCCG ATCGACGGTA TCGCCGCGGC GATCGACAGG
CTGGGCGTTC GCTGCTGCGT TGCCTCCTCC AGCCAGATGG AGCGAATCCG GTTGTCGCTG
TCGGTGACCG GGCTTCTCGA CAGGCTGCCC GACATCTTCA GCGCAACGAT GGTCAAGCGC
GGCAAGCCGG CGCCCGATCT CTTCCTGCAT GCGGCGCGTG AAATGCAGGT CGAGCCGGCT
CATTGCCTTG TCGTCGAAGA CAGCCCGGCC GGCATTGCCG CCGCCAAGGC AGCAGGCATG
ACGGTCTTTG CCTTCACCGG CGGATCACAC GCCAATTTCA CCGGATATCG TGCCGAACTC
GACCGCCTTT CGCCTGATGT GGTGTTTGAC GCCATGCCGG ATTTGATACA CCTTGTCCGC
AACCATAAGC TGGACGGGAC CAAGACTTGA
 
Protein sequence
MADAETRLVI FDCDGVLVDS EPISISVLVG AMNDLGVSIT EDQAYERFLG RSLSTLIDTL 
ETEFNVHADE EFLERIRIEL YARFRTELKP IDGIAAAIDR LGVRCCVASS SQMERIRLSL
SVTGLLDRLP DIFSATMVKR GKPAPDLFLH AAREMQVEPA HCLVVEDSPA GIAAAKAAGM
TVFAFTGGSH ANFTGYRAEL DRLSPDVVFD AMPDLIHLVR NHKLDGTKT