Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0267 |
Symbol | |
ID | 8723995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 350570 |
End bp | 351232 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_003385131 |
Protein GI | 284035201 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.583067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.103324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTG TAATTTTTGA CATGGATGGG GTCATTGTTG ATACAAACCC GCATCACCGC ATCGCCTGGC GCGAGTACTA CCAACGCTAC GGTAAAACAT TGAGTGATCA GGACTTTGTG CAGTATGTTT CAGGAAAGCA TAACGACGAT ATACTAAGGC ACCTTTTTGC CGGGCAAGAT TTAACCGCCG ACGAAGCAAA ACGGCTGGCC CACGAAAAAG AAGCCCTGTT TCGGGAATTA TACCAACAAT CGATTACACC AATTGAGGGC CTGATCCCAT TTTTAAAGAC ATTAAAAGAG GCCAATATGC TTACGGCTGT GGCCACGTCG GCTCCAGTTG AGAATCTCGA CTTCATTATG GATGCACTCG GGATTCGCTC TTATTTTGAC GTATTGCTAA ACGAAAGCAT GGTTAGCCAT CCTAAGCCTG ACCCTGAGAT TTATCAGAAA GCCATGGGTT TGCTGGGCGT AGAGCCAACG GACAGCGTTA TTTTTGAAGA CTCAATGACG GGTATTCAGG CCGCTAAAGC CGCCGGAGCC CTGGTGGTTG GAATGGCCAC TACACAAGCA CCTGATGAGC TATGGCCGTT CGTCGACGAC GTTGCGCATG ACTTTACAGA TATGACCGTA GATCGACTGG AAAAACTGGT TAAGGTTTTT TAA
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Protein sequence | MKAVIFDMDG VIVDTNPHHR IAWREYYQRY GKTLSDQDFV QYVSGKHNDD ILRHLFAGQD LTADEAKRLA HEKEALFREL YQQSITPIEG LIPFLKTLKE ANMLTAVATS APVENLDFIM DALGIRSYFD VLLNESMVSH PKPDPEIYQK AMGLLGVEPT DSVIFEDSMT GIQAAKAAGA LVVGMATTQA PDELWPFVDD VAHDFTDMTV DRLEKLVKVF
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