Gene Ping_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1410 
Symbol 
ID4626962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1730616 
End bp1731293 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content37% 
IMG OID639796616 
Productphosphoglycolate phosphatase 
Protein accessionYP_942826 
Protein GI119945146 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATTTA CTAGCAAAGA AGTTATCTTG TTTGATTTAG ACGGTACCCT TATTGACAGT 
GCACCAGACT TATCATTAGC CGTTAACCAT ATGTTAAGTG CACTGCAACG CCCCACTTTT
GAGCAAGATA TCATTCGCTC TTGGGTTGGT AATGGTGCGG AAGTTCTGGT TAAAAGAGGT
TTGTCAGGAC AAGATGTGAT CGATGAAAAT ATTGATCCGG ACTTAGTTGA AAAATCATTA
CAACTGTTCT TTAACTTTTA TAAAAAAAAC TTATGTGTTG ATACCAAACT TTATCCTAGT
GTGCGCGCCT GTTTAAAAAT ATTAAAAGCC AAAGGTTACC GCTTAGTGAT TGTAACCAAT
AAACCCTTTG AATTTATCGA ACCCATCTTA GAAGGGTTAG AATTGACCGG CTTGTTTGAA
ATGTTATTAG GGGGCGATAG TCTGGAAAAA CGAAAACCTG ATGCTTTACC TTTATTACAT
GTTTGTGAAA AACTTTCCGT CACCGTTGAG CAGTGTTTGA TGGTTGGTGA TTCGAAAAAT
GATATTCTGG CTGCCAAGGC AGCTAAGATG GAATCTATCG GTCTAACTTA TGGGTATAAT
TATGGCGAAG ATATTAGCCG CTATAATCCC GAAGCTGTTT TTGATGATTT TTCTGATATT
GTCGCAACAC TCAGTTAA
 
Protein sequence
MKFTSKEVIL FDLDGTLIDS APDLSLAVNH MLSALQRPTF EQDIIRSWVG NGAEVLVKRG 
LSGQDVIDEN IDPDLVEKSL QLFFNFYKKN LCVDTKLYPS VRACLKILKA KGYRLVIVTN
KPFEFIEPIL EGLELTGLFE MLLGGDSLEK RKPDALPLLH VCEKLSVTVE QCLMVGDSKN
DILAAKAAKM ESIGLTYGYN YGEDISRYNP EAVFDDFSDI VATLS