More than 300 homologs were found in PanDaTox collection
for query gene Snas_3324 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_3324  two component transcriptional regulator, LuxR family  100 
 
 
219 aa  430  1e-120  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0107044  normal  0.345616 
 
 
-
 
NC_013947  Snas_2672  two component transcriptional regulator, LuxR family  67.14 
 
 
219 aa  263  2e-69  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.240505 
 
 
-
 
NC_014158  Tpau_2414  two component transcriptional regulator, LuxR family  61.79 
 
 
215 aa  242  3e-63  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  54.21 
 
 
215 aa  201  5e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  50.46 
 
 
219 aa  193  1e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  52.31 
 
 
232 aa  189  4e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  50 
 
 
230 aa  188  5e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  51.38 
 
 
220 aa  186  2e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  50.89 
 
 
226 aa  184  6e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013159  Svir_32780  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.31 
 
 
216 aa  180  1e-44  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  49.3 
 
 
213 aa  179  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  48.83 
 
 
221 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  49.31 
 
 
218 aa  177  9e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  47 
 
 
221 aa  177  1e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  48.82 
 
 
220 aa  177  1e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  47.95 
 
 
221 aa  176  2e-43  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  47.51 
 
 
227 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  48.56 
 
 
215 aa  175  5e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  50.23 
 
 
220 aa  174  7e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  47 
 
 
221 aa  174  9e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  47.96 
 
 
226 aa  174  9.999999999999999e-43  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  52.36 
 
 
215 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  47.89 
 
 
216 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  45.62 
 
 
225 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  48.2 
 
 
229 aa  172  2.9999999999999996e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  48.37 
 
 
215 aa  172  3.9999999999999995e-42  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.44 
 
 
217 aa  172  3.9999999999999995e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  47 
 
 
222 aa  171  6.999999999999999e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  44.39 
 
 
224 aa  171  6.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  47 
 
 
225 aa  170  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  45.16 
 
 
225 aa  171  1e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  46.73 
 
 
225 aa  171  1e-41  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  49.07 
 
 
215 aa  170  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  46.26 
 
 
219 aa  171  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  48.37 
 
 
228 aa  170  2e-41  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45.83 
 
 
224 aa  170  2e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.98 
 
 
218 aa  169  3e-41  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  47.25 
 
 
225 aa  169  3e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  47.2 
 
 
219 aa  169  4e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.65 
 
 
222 aa  169  4e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  49.53 
 
 
218 aa  168  5e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  44.19 
 
 
215 aa  168  5e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  45.58 
 
 
239 aa  168  6e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  47.47 
 
 
214 aa  168  7e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  47.66 
 
 
219 aa  168  7e-41  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  47 
 
 
219 aa  167  8e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  45.87 
 
 
225 aa  167  9e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  46.98 
 
 
222 aa  167  1e-40  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  44.44 
 
 
221 aa  167  1e-40  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  45.25 
 
 
223 aa  166  2e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  48.37 
 
 
218 aa  167  2e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  44.39 
 
 
223 aa  166  2e-40  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  47.71 
 
 
220 aa  166  2e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  46.73 
 
 
220 aa  166  4e-40  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  46.51 
 
 
220 aa  165  5e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  47.85 
 
 
213 aa  165  5e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  46.95 
 
 
219 aa  165  5.9999999999999996e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  47.2 
 
 
219 aa  165  5.9999999999999996e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  44.91 
 
 
225 aa  164  6.9999999999999995e-40  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  46.12 
 
 
225 aa  164  1.0000000000000001e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  45.21 
 
 
228 aa  164  1.0000000000000001e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  44.78 
 
 
242 aa  164  1.0000000000000001e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  46.08 
 
 
218 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  48.83 
 
 
227 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  44.09 
 
 
227 aa  162  5.0000000000000005e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  45.25 
 
 
225 aa  162  5.0000000000000005e-39  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  45.58 
 
 
222 aa  162  5.0000000000000005e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  35.57 
 
 
261 aa  162  5.0000000000000005e-39  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  44.24 
 
 
225 aa  161  6e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.95 
 
 
225 aa  161  7e-39  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  46.61 
 
 
230 aa  161  8.000000000000001e-39  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  43.05 
 
 
224 aa  161  8.000000000000001e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  45.33 
 
 
224 aa  160  9e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  46.05 
 
 
229 aa  160  1e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  42.27 
 
 
231 aa  160  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  45.12 
 
 
226 aa  160  2e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.74 
 
 
229 aa  159  2e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  44.2 
 
 
226 aa  160  2e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  46.95 
 
 
217 aa  159  2e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  41.23 
 
 
228 aa  159  2e-38  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  43.32 
 
 
228 aa  159  3e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  43.12 
 
 
226 aa  159  3e-38  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  46.26 
 
 
234 aa  159  3e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  46.73 
 
 
221 aa  159  3e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  45.62 
 
 
220 aa  159  4e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  44.55 
 
 
222 aa  159  4e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  47.22 
 
 
217 aa  158  5e-38  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.56 
 
 
236 aa  158  5e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  45.45 
 
 
221 aa  158  5e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  42.06 
 
 
216 aa  158  6e-38  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  44.44 
 
 
244 aa  158  7e-38  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.84 
 
 
230 aa  158  7e-38  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  45.37 
 
 
226 aa  158  8e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  43.06 
 
 
215 aa  157  8e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  43.93 
 
 
217 aa  157  1e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  44.59 
 
 
230 aa  157  1e-37  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  43.93 
 
 
220 aa  157  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  42.6 
 
 
230 aa  157  1e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  46.26 
 
 
223 aa  157  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  45.85 
 
 
214 aa  157  1e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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