More than 300 homologs were found in PanDaTox collection
for query gene Krad_2525 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_2525  short-chain dehydrogenase/reductase SDR  100 
 
 
276 aa  546  1e-154  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0303  short-chain dehydrogenase/reductase SDR  63.36 
 
 
262 aa  325  7e-88  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0313  short-chain dehydrogenase/reductase SDR  63.36 
 
 
262 aa  325  7e-88  Mycobacterium sp. KMS  Bacteria  normal  normal  0.19239 
 
 
-
 
NC_009077  Mjls_0294  short-chain dehydrogenase/reductase SDR  62.98 
 
 
262 aa  322  5e-87  Mycobacterium sp. JLS  Bacteria  normal  0.948025  normal 
 
 
-
 
NC_013174  Jden_0145  short-chain dehydrogenase/reductase SDR  46.62 
 
 
267 aa  242  5e-63  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0175  short-chain dehydrogenase/reductase SDR  49.59 
 
 
267 aa  229  5e-59  Meiothermus ruber DSM 1279  Bacteria  normal  0.319176  normal 
 
 
-
 
NC_013169  Ksed_03130  short-chain dehydrogenase of unknown substrate specificity  46.32 
 
 
275 aa  228  1e-58  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3168  short-chain dehydrogenase/reductase SDR  47.39 
 
 
269 aa  220  1.9999999999999999e-56  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.685444  normal 
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  39.69 
 
 
273 aa  171  1e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  38.95 
 
 
281 aa  161  1e-38  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  37.65 
 
 
279 aa  157  1e-37  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  37.78 
 
 
271 aa  157  3e-37  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  35.69 
 
 
279 aa  146  3e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  35.42 
 
 
273 aa  145  8.000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  37.25 
 
 
300 aa  135  5e-31  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  38.75 
 
 
282 aa  135  5e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  36.47 
 
 
300 aa  135  9.999999999999999e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_009656  PSPA7_3796  putative short-chain dehydrogenase  36.02 
 
 
295 aa  133  3e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  0.205058  n/a   
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  36.86 
 
 
300 aa  133  3e-30  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_009484  Acry_1087  short-chain dehydrogenase/reductase SDR  32.39 
 
 
286 aa  133  3e-30  Acidiphilium cryptum JF-5  Bacteria  normal  0.252629  n/a   
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  36.86 
 
 
300 aa  132  3.9999999999999996e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  36.86 
 
 
300 aa  132  3.9999999999999996e-30  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_013739  Cwoe_5665  short-chain dehydrogenase/reductase SDR  36.5 
 
 
275 aa  132  5e-30  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  34.9 
 
 
302 aa  132  6.999999999999999e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  34.9 
 
 
302 aa  132  6.999999999999999e-30  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  34.9 
 
 
302 aa  132  6.999999999999999e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  34.9 
 
 
302 aa  132  9e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  34.9 
 
 
302 aa  132  9e-30  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  34.9 
 
 
302 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  34.9 
 
 
302 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  36.02 
 
 
295 aa  130  2.0000000000000002e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_010511  M446_3686  short-chain dehydrogenase/reductase SDR  36.95 
 
 
273 aa  130  3e-29  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00031135 
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  35.06 
 
 
280 aa  130  3e-29  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_009523  RoseRS_2412  short-chain dehydrogenase/reductase SDR  38.91 
 
 
269 aa  129  6e-29  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00185291  normal 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  34.19 
 
 
271 aa  128  1.0000000000000001e-28  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_014158  Tpau_1209  short-chain dehydrogenase/reductase SDR  35.6 
 
 
275 aa  127  2.0000000000000002e-28  Tsukamurella paurometabola DSM 20162  Bacteria  hitchhiker  0.00962961  n/a   
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  35.29 
 
 
308 aa  127  2.0000000000000002e-28  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2257  short-chain dehydrogenase/reductase SDR  35.8 
 
 
275 aa  126  3e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.116431  n/a   
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  35.29 
 
 
308 aa  126  3e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_007650  BTH_II0404  short chain dehydrogenase/reductase family oxidoreductase  33.73 
 
 
302 aa  126  5e-28  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  31.87 
 
 
296 aa  124  1e-27  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  32.73 
 
 
281 aa  123  3e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  31.87 
 
 
296 aa  123  4e-27  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_007488  RSP_7370  short-chain alcohol dehydrogenase  41.21 
 
 
247 aa  120  1.9999999999999998e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  31.54 
 
 
312 aa  120  3e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  32.31 
 
 
312 aa  120  3e-26  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  33.58 
 
 
276 aa  120  3e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  32.56 
 
 
278 aa  119  3.9999999999999996e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_007650  BTH_II1472  short chain dehydrogenase  31.68 
 
 
315 aa  119  6e-26  Burkholderia thailandensis E264  Bacteria  normal  0.730562  n/a   
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  32.69 
 
 
311 aa  119  7e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  31.3 
 
 
308 aa  118  9.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  31.3 
 
 
308 aa  118  9.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  31.92 
 
 
307 aa  117  9.999999999999999e-26  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_009524  PsycPRwf_0304  short-chain dehydrogenase/reductase SDR  31.18 
 
 
309 aa  117  9.999999999999999e-26  Psychrobacter sp. PRwf-1  Bacteria  normal  0.074209  normal  0.817715 
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  31.3 
 
 
308 aa  118  9.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  31.92 
 
 
309 aa  118  9.999999999999999e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  31.3 
 
 
308 aa  118  9.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  31.92 
 
 
309 aa  118  9.999999999999999e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  31.3 
 
 
308 aa  118  9.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  31.92 
 
 
309 aa  118  9.999999999999999e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_008726  Mvan_2034  short chain dehydrogenase  31.88 
 
 
290 aa  117  1.9999999999999998e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.959562 
 
 
-
 
NC_010725  Mpop_4692  short-chain dehydrogenase/reductase SDR  34.63 
 
 
274 aa  117  1.9999999999999998e-25  Methylobacterium populi BJ001  Bacteria  normal  0.169711  normal  0.0760952 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  32.95 
 
 
295 aa  117  1.9999999999999998e-25  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  32.29 
 
 
296 aa  117  3e-25  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5627  short-chain dehydrogenase/reductase SDR  33.68 
 
 
282 aa  116  5e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.193827 
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  34.01 
 
 
276 aa  115  6.9999999999999995e-25  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_009565  TBFG_13102  short-chain type dehydrogenase/reductase  33.46 
 
 
276 aa  115  8.999999999999998e-25  Mycobacterium tuberculosis F11  Bacteria  normal  0.432292  normal 
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  34.56 
 
 
276 aa  115  1.0000000000000001e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  32.21 
 
 
276 aa  114  2.0000000000000002e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_009512  Pput_3969  short chain dehydrogenase  34.21 
 
 
269 aa  113  3e-24  Pseudomonas putida F1  Bacteria  normal  normal  0.246181 
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  34.01 
 
 
267 aa  113  3e-24  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_011757  Mchl_4548  short-chain dehydrogenase/reductase SDR  34.27 
 
 
274 aa  112  8.000000000000001e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.239905  normal  0.858139 
 
 
-
 
NC_009439  Pmen_1244  short chain dehydrogenase  32.94 
 
 
270 aa  111  1.0000000000000001e-23  Pseudomonas mendocina ymp  Bacteria  normal  0.542872  normal  0.404553 
 
 
-
 
NC_009565  TBFG_13074  short chain dehydrogenase  32.57 
 
 
287 aa  111  1.0000000000000001e-23  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.486367 
 
 
-
 
NC_002947  PP_1745  short chain dehydrogenase  33.83 
 
 
269 aa  110  2.0000000000000002e-23  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  31.41 
 
 
290 aa  110  2.0000000000000002e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4179  short-chain dehydrogenase/reductase SDR  34.27 
 
 
274 aa  109  4.0000000000000004e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.719073  normal 
 
 
-
 
NC_009565  TBFG_12242  short chain dehydrogenase  34.1 
 
 
592 aa  108  9.000000000000001e-23  Mycobacterium tuberculosis F11  Bacteria  normal  0.0208017  normal  0.29752 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  33.98 
 
 
257 aa  108  1e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_007952  Bxe_B1790  short chain dehydrogenase  30.42 
 
 
307 aa  107  2e-22  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00000125648 
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  32.16 
 
 
276 aa  106  4e-22  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  32.16 
 
 
276 aa  106  4e-22  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  32.16 
 
 
276 aa  106  4e-22  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0388  short-chain dehydrogenase/reductase SDR  34.54 
 
 
269 aa  106  5e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.14599 
 
 
-
 
NC_010501  PputW619_1295  short chain dehydrogenase  31.95 
 
 
271 aa  105  6e-22  Pseudomonas putida W619  Bacteria  normal  0.657463  normal 
 
 
-
 
NC_009077  Mjls_1791  short chain dehydrogenase  30.45 
 
 
285 aa  105  6e-22  Mycobacterium sp. JLS  Bacteria  normal  0.0146977  normal 
 
 
-
 
NC_010676  Bphyt_4878  short-chain dehydrogenase/reductase SDR  29.43 
 
 
302 aa  105  8e-22  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00176242  normal  0.778008 
 
 
-
 
NC_004578  PSPTO_1627  oxidoreductase, short chain dehydrogenase/reductase family  31.33 
 
 
271 aa  104  1e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0861444  n/a   
 
 
-
 
NC_008146  Mmcs_1810  short chain dehydrogenase  30.08 
 
 
285 aa  104  2e-21  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1171  short-chain dehydrogenase/reductase SDR  37.56 
 
 
238 aa  104  2e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.399765 
 
 
-
 
NC_008705  Mkms_1857  short chain dehydrogenase  30.08 
 
 
285 aa  104  2e-21  Mycobacterium sp. KMS  Bacteria  normal  normal  0.160159 
 
 
-
 
NC_009380  Strop_2396  short-chain dehydrogenase/reductase SDR  33.59 
 
 
321 aa  103  3e-21  Salinispora tropica CNB-440  Bacteria  normal  0.13478  normal 
 
 
-
 
NC_010322  PputGB1_1337  short chain dehydrogenase  31.95 
 
 
269 aa  103  3e-21  Pseudomonas putida GB-1  Bacteria  normal  normal  0.950533 
 
 
-
 
NC_008347  Mmar10_1139  short-chain dehydrogenase/reductase SDR  36.4 
 
 
277 aa  103  4e-21  Maricaulis maris MCS10  Bacteria  normal  0.248176  normal  0.05597 
 
 
-
 
NC_008463  PA14_21640  short chain dehydrogenase  31.73 
 
 
270 aa  102  5e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  27.65 
 
 
321 aa  102  9e-21  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  28.23 
 
 
263 aa  101  1e-20  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_1778  short-chain dehydrogenase/reductase SDR  30 
 
 
243 aa  101  1e-20  Metallosphaera sedula DSM 5348  Archaea  normal  0.809428  normal 
 
 
-
 
NC_009656  PSPA7_1844  short chain dehydrogenase  32.13 
 
 
270 aa  101  1e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2203  short chain dehydrogenase  30.86 
 
 
273 aa  100  2e-20  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.000419362  n/a   
 
 
-
 
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