More than 300 homologs were found in PanDaTox collection
for query gene Snas_1509 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  100 
 
 
221 aa  437  9.999999999999999e-123  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  57.21 
 
 
215 aa  229  2e-59  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  56.28 
 
 
217 aa  226  3e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  53.67 
 
 
225 aa  222  3e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  53.85 
 
 
230 aa  218  6e-56  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  56.28 
 
 
214 aa  218  7.999999999999999e-56  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  53.67 
 
 
222 aa  216  1e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  52.97 
 
 
215 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  53.21 
 
 
221 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  54.09 
 
 
222 aa  214  9.999999999999999e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  52.05 
 
 
226 aa  211  4.9999999999999996e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  51.6 
 
 
233 aa  210  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  51.82 
 
 
224 aa  208  4e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  52.75 
 
 
221 aa  208  6e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  51.83 
 
 
224 aa  205  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  51.83 
 
 
218 aa  204  9e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  53.21 
 
 
221 aa  203  1e-51  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  49.78 
 
 
225 aa  204  1e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  49.33 
 
 
229 aa  202  3e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  50.45 
 
 
221 aa  201  6e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  50.46 
 
 
219 aa  201  7e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  51.16 
 
 
215 aa  201  8e-51  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  51.61 
 
 
228 aa  199  3e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  49.77 
 
 
223 aa  199  3e-50  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  51.39 
 
 
224 aa  199  3.9999999999999996e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  47.71 
 
 
221 aa  197  1.0000000000000001e-49  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  48.64 
 
 
220 aa  196  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  51.14 
 
 
224 aa  196  3e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  51.61 
 
 
226 aa  194  6e-49  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  47.93 
 
 
218 aa  194  7e-49  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  50 
 
 
247 aa  194  7e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  50.93 
 
 
226 aa  194  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  47.62 
 
 
244 aa  193  2e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  49.08 
 
 
218 aa  192  3e-48  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  49.07 
 
 
221 aa  192  3e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  50.47 
 
 
302 aa  192  3e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  49.55 
 
 
232 aa  192  5e-48  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.31 
 
 
225 aa  191  6e-48  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  50.69 
 
 
226 aa  191  8e-48  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  47.27 
 
 
226 aa  191  8e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  49.32 
 
 
218 aa  190  1e-47  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  51.58 
 
 
224 aa  190  1e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  47 
 
 
221 aa  190  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  48 
 
 
220 aa  190  2e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.78 
 
 
222 aa  189  2.9999999999999997e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  45.37 
 
 
219 aa  189  2.9999999999999997e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  47.47 
 
 
215 aa  189  2.9999999999999997e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  46.82 
 
 
223 aa  189  4e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  49.09 
 
 
223 aa  188  5e-47  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  47.49 
 
 
225 aa  188  5e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  49.77 
 
 
217 aa  188  5e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  45.26 
 
 
234 aa  188  5.999999999999999e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  46.92 
 
 
225 aa  187  8e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  47.51 
 
 
227 aa  187  8e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  52.11 
 
 
217 aa  187  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  47.51 
 
 
225 aa  187  1e-46  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  50.46 
 
 
214 aa  186  2e-46  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  48.39 
 
 
220 aa  186  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  46.36 
 
 
226 aa  186  3e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  50.68 
 
 
222 aa  186  3e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  43.98 
 
 
219 aa  185  6e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  47.27 
 
 
236 aa  184  7e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  48.87 
 
 
226 aa  184  8e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  46.05 
 
 
228 aa  184  8e-46  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  45.5 
 
 
231 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  48.13 
 
 
225 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.33 
 
 
261 aa  183  2.0000000000000003e-45  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  41.32 
 
 
250 aa  183  2.0000000000000003e-45  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.3 
 
 
222 aa  183  2.0000000000000003e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  44.34 
 
 
230 aa  183  2.0000000000000003e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.8 
 
 
230 aa  182  3e-45  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.58 
 
 
226 aa  182  4.0000000000000006e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  47.3 
 
 
241 aa  182  4.0000000000000006e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.08 
 
 
222 aa  182  4.0000000000000006e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  46.41 
 
 
234 aa  181  7e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  44.34 
 
 
230 aa  181  8.000000000000001e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  44.7 
 
 
219 aa  181  9.000000000000001e-45  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  47.06 
 
 
222 aa  181  9.000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  45.91 
 
 
223 aa  180  2e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  46.73 
 
 
225 aa  179  2e-44  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  46.08 
 
 
221 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  44.65 
 
 
239 aa  179  2.9999999999999997e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  45.83 
 
 
223 aa  179  4e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  44.8 
 
 
225 aa  178  4e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  44.44 
 
 
220 aa  179  4e-44  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  44.24 
 
 
218 aa  179  4e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  47.66 
 
 
228 aa  178  5.999999999999999e-44  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  48.18 
 
 
224 aa  178  7e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  46.4 
 
 
226 aa  178  7e-44  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  44.69 
 
 
227 aa  177  8e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  42.34 
 
 
233 aa  177  8e-44  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  46.08 
 
 
216 aa  177  1e-43  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  48.37 
 
 
217 aa  177  1e-43  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  46.22 
 
 
225 aa  177  1e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  45.87 
 
 
225 aa  176  2e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  43.38 
 
 
228 aa  176  3e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_009664  Krad_2537  two component transcriptional regulator, LuxR family  44.64 
 
 
242 aa  176  3e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  46.05 
 
 
214 aa  176  3e-43  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  42.08 
 
 
231 aa  176  3e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  49.07 
 
 
230 aa  174  7e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
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