More than 300 homologs were found in PanDaTox collection
for query gene PXO_06170 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010717  PXO_00996  response regulator  100 
 
 		 210 aa  416  9.999999999999999e-116  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_010717  PXO_06170  response regulator  100 
 
 		 210 aa  416  9.999999999999999e-116  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.624626  n/a   
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  78.95 
 
 		 212 aa  332  2e-90  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  44.39 
 
 		 217 aa  166  2e-40  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  46.6 
 
 		 226 aa  165  4e-40  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  42.05 
 
 		 219 aa  160  1e-38  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  43.27 
 
 		 219 aa  156  2e-37  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  43.27 
 
 		 219 aa  155  4e-37  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  41.83 
 
 		 219 aa  153  2e-36  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  43.54 
 
 		 219 aa  151  5e-36  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  40.98 
 
 		 213 aa  151  5.9999999999999996e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  43.19 
 
 		 214 aa  151  5.9999999999999996e-36  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  41.55 
 
 		 219 aa  150  1e-35  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  37.75 
 
 		 215 aa  150  1e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  39.32 
 
 		 214 aa  150  2e-35  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  39.23 
 
 		 222 aa  148  7e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  36.23 
 
 		 217 aa  147  2.0000000000000003e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  41.18 
 
 		 206 aa  146  2.0000000000000003e-34  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  39.02 
 
 		 212 aa  144  1e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  41.98 
 
 		 221 aa  143  2e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013411  GYMC61_2911  two component transcriptional regulator, LuxR family  37.2 
 
 		 209 aa  143  2e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  39.9 
 
 		 216 aa  142  3e-33  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  38.73 
 
 		 223 aa  142  3e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  37.86 
 
 		 218 aa  142  3e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  39.41 
 
 		 214 aa  142  4e-33  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.64 
 
 		 215 aa  142  5e-33  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  37.5 
 
 		 216 aa  141  8e-33  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  37.56 
 
 		 218 aa  141  8e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  39.79 
 
 		 213 aa  140  9e-33  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  39.79 
 
 		 213 aa  140  9e-33  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  36.1 
 
 		 213 aa  141  9e-33  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  39.9 
 
 		 208 aa  140  9.999999999999999e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  37.5 
 
 		 216 aa  140  9.999999999999999e-33  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  37.62 
 
 		 229 aa  139  3e-32  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  37.7 
 
 		 221 aa  139  3.9999999999999997e-32  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  37.56 
 
 		 233 aa  139  3.9999999999999997e-32  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  42.03 
 
 		 221 aa  139  3.9999999999999997e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  37.69 
 
 		 215 aa  138  7.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  38.14 
 
 		 225 aa  138  7.999999999999999e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_008255  CHU_1317  response regulator  33.18 
 
 		 220 aa  137  8.999999999999999e-32  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  36.06 
 
 		 214 aa  137  1e-31  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_007005  Psyr_3299  LuxR response regulator receiver  38.28 
 
 		 220 aa  137  1e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal  1 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  41.04 
 
 		 222 aa  137  1e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  35.55 
 
 		 210 aa  136  2e-31  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  34.15 
 
 		 210 aa  137  2e-31  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  35.71 
 
 		 219 aa  137  2e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  37.8 
 
 		 221 aa  136  2e-31  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  35.55 
 
 		 239 aa  136  2e-31  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  37.14 
 
 		 229 aa  136  3.0000000000000003e-31  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_3526  DNA-binding response regulator, LuxR family  37.02 
 
 		 220 aa  135  3.0000000000000003e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0134281  n/a   
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  35.92 
 
 		 213 aa  135  3.0000000000000003e-31  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  40 
 
 		 219 aa  136  3.0000000000000003e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  38.5 
 
 		 225 aa  136  3.0000000000000003e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  38.16 
 
 		 223 aa  135  4e-31  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  37.02 
 
 		 218 aa  135  4e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  36.14 
 
 		 213 aa  135  4e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  39.05 
 
 		 217 aa  135  5e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  36.32 
 
 		 216 aa  135  5e-31  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  36.27 
 
 		 264 aa  135  5e-31  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  40 
 
 		 224 aa  134  8e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  37.38 
 
 		 232 aa  134  8e-31  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  35.1 
 
 		 215 aa  134  9e-31  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.15 
 
 		 225 aa  134  9e-31  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  37.14 
 
 		 218 aa  134  9.999999999999999e-31  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  37.14 
 
 		 218 aa  134  9.999999999999999e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  39.8 
 
 		 230 aa  134  9.999999999999999e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  36.45 
 
 		 236 aa  134  9.999999999999999e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  38.54 
 
 		 220 aa  134  9.999999999999999e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  35.71 
 
 		 215 aa  133  1.9999999999999998e-30  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  34.27 
 
 		 217 aa  133  1.9999999999999998e-30  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  36.49 
 
 		 250 aa  133  1.9999999999999998e-30  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  40.1 
 
 		 214 aa  133  1.9999999999999998e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  33.49 
 
 		 222 aa  133  1.9999999999999998e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  37.38 
 
 		 232 aa  133  1.9999999999999998e-30  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  35.89 
 
 		 215 aa  133  1.9999999999999998e-30  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_4951  two component transcriptional regulator, LuxR family  38.83 
 
 		 210 aa  133  1.9999999999999998e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.710213  n/a   
 
 
-
 
NC_010511  M446_4923  two component LuxR family transcriptional regulator  39.22 
 
 		 210 aa  133  1.9999999999999998e-30  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  39.32 
 
 		 211 aa  133  1.9999999999999998e-30  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  34.78 
 
 		 215 aa  133  1.9999999999999998e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  34.27 
 
 		 217 aa  133  1.9999999999999998e-30  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  39 
 
 		 215 aa  133  1.9999999999999998e-30  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  38.24 
 
 		 214 aa  133  1.9999999999999998e-30  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  39.81 
 
 		 241 aa  133  1.9999999999999998e-30  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  38.94 
 
 		 217 aa  133  1.9999999999999998e-30  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_1848  response regulator  35.92 
 
 		 218 aa  132  3e-30  Serratia proteamaculans 568  Bacteria  normal  0.0524957  normal  1 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  35.71 
 
 		 215 aa  132  3e-30  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  39.71 
 
 		 220 aa  132  3e-30  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  38.31 
 
 		 217 aa  132  3e-30  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  38.24 
 
 		 214 aa  132  3e-30  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  39.22 
 
 		 213 aa  132  3.9999999999999996e-30  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
CP001637  EcDH1_1732  two component transcriptional regulator, LuxR family  36.23 
 
 		 218 aa  132  5e-30  Escherichia coli DH1  Bacteria  hitchhiker  0.00000000000321601  n/a   
 
 
-
 
NC_010658  SbBS512_E1041  response regulator  36.23 
 
 		 218 aa  132  5e-30  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000000644757  n/a   
 
 
-
 
NC_009801  EcE24377A_2147  response regulator  36.23 
 
 		 218 aa  132  5e-30  Escherichia coli E24377A  Bacteria  hitchhiker  0.0000040455  n/a   
 
 
-
 
NC_010468  EcolC_1725  response regulator  36.23 
 
 		 218 aa  132  5e-30  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.000351159  normal  1 
 
 
-
 
NC_010498  EcSMS35_1269  response regulator  36.23 
 
 		 218 aa  132  5e-30  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000584326  hitchhiker  0.00198125 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  37.75 
 
 		 213 aa  132  5e-30  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_1192  transcriptional regulator of LuxR family protein  33.17 
 
 		 214 aa  132  5e-30  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  37.74 
 
 		 219 aa  132  5e-30  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal  1 
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  35.75 
 
 		 210 aa  132  5e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  34.76 
 
 		 215 aa  131  6e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
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