More than 300 homologs were found in PanDaTox collection
for query gene Xcel_1026 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_1026  cell envelope-related transcriptional attenuator  100 
 
 
402 aa  787    Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.999724  n/a   
 
 
-
 
NC_013530  Xcel_1025  cell envelope-related transcriptional attenuator  64.46 
 
 
434 aa  401  9.999999999999999e-111  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.11457  n/a   
 
 
-
 
NC_014151  Cfla_3214  cell envelope-related transcriptional attenuator  52.29 
 
 
443 aa  338  9e-92  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00000235319 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  43.06 
 
 
417 aa  256  6e-67  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  45.59 
 
 
396 aa  251  1e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  41.48 
 
 
442 aa  248  1e-64  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  42.52 
 
 
365 aa  245  8e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  42.35 
 
 
389 aa  241  1e-62  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  41.53 
 
 
391 aa  230  4e-59  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  42.86 
 
 
395 aa  227  3e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3844  cell envelope-related protein transcriptional attenuator  39.94 
 
 
373 aa  206  5e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0589  putative transcriptional regulator  36.75 
 
 
498 aa  193  4e-48  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.581304 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  33.98 
 
 
400 aa  178  1e-43  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  37.2 
 
 
506 aa  173  3.9999999999999995e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  36.88 
 
 
379 aa  162  7e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  34.04 
 
 
406 aa  153  5e-36  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_013521  Sked_00540  cell envelope-related function transcriptional attenuator common domain protein  40.86 
 
 
357 aa  152  1e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.916603  normal  0.105126 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  37.41 
 
 
481 aa  151  2e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  32.01 
 
 
584 aa  151  2e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  32.49 
 
 
478 aa  149  9e-35  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  34.9 
 
 
453 aa  149  1.0000000000000001e-34  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  33.33 
 
 
520 aa  148  2.0000000000000003e-34  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  35.69 
 
 
468 aa  148  2.0000000000000003e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  32.75 
 
 
395 aa  146  8.000000000000001e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  32.46 
 
 
643 aa  141  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  31.3 
 
 
480 aa  141  1.9999999999999998e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  32.97 
 
 
618 aa  140  3.9999999999999997e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  29.86 
 
 
530 aa  135  9e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  33.58 
 
 
540 aa  132  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  32.64 
 
 
481 aa  130  5.0000000000000004e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  32.32 
 
 
509 aa  129  1.0000000000000001e-28  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  32.06 
 
 
619 aa  126  8.000000000000001e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  29.92 
 
 
549 aa  126  8.000000000000001e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  29.17 
 
 
521 aa  124  4e-27  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  30.08 
 
 
487 aa  119  9e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  31.99 
 
 
497 aa  118  1.9999999999999998e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  29.65 
 
 
468 aa  118  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  30.58 
 
 
504 aa  117  3e-25  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  32.27 
 
 
365 aa  112  1.0000000000000001e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  30.74 
 
 
499 aa  112  1.0000000000000001e-23  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  34.73 
 
 
311 aa  110  6e-23  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  34.73 
 
 
311 aa  110  6e-23  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  34.73 
 
 
311 aa  110  6e-23  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  29.57 
 
 
486 aa  107  3e-22  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  28.4 
 
 
551 aa  106  6e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  28.52 
 
 
505 aa  103  7e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  34.87 
 
 
491 aa  100  4e-20  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  31.75 
 
 
405 aa  100  5e-20  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  28.67 
 
 
465 aa  99.8  8e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  26.58 
 
 
734 aa  99.4  9e-20  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  28.73 
 
 
522 aa  98.2  2e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  32.03 
 
 
390 aa  98.2  2e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  32.27 
 
 
307 aa  97.8  3e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  29.41 
 
 
409 aa  96.3  8e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  30.23 
 
 
377 aa  96.3  9e-19  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  30.39 
 
 
1336 aa  95.1  2e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  30.98 
 
 
349 aa  94.4  3e-18  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  32.09 
 
 
336 aa  94  4e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  31.06 
 
 
516 aa  93.6  5e-18  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  28.24 
 
 
362 aa  93.6  5e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  30.77 
 
 
374 aa  93.2  7e-18  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  29.53 
 
 
382 aa  93.2  8e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  32.38 
 
 
404 aa  93.2  8e-18  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  28.89 
 
 
420 aa  92.8  9e-18  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  27.36 
 
 
393 aa  92.4  1e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  27.46 
 
 
512 aa  91.7  2e-17  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  28.18 
 
 
521 aa  91.7  2e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  31.02 
 
 
414 aa  90.5  4e-17  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  29.15 
 
 
545 aa  90.5  5e-17  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  24.64 
 
 
563 aa  89.4  1e-16  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  29.97 
 
 
410 aa  89  2e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  31.62 
 
 
453 aa  88.2  2e-16  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  28.48 
 
 
560 aa  88.2  3e-16  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  33.33 
 
 
403 aa  87.4  4e-16  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  30.67 
 
 
520 aa  87.4  4e-16  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  26.73 
 
 
649 aa  87  5e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  29.34 
 
 
344 aa  86.3  8e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  29.54 
 
 
567 aa  86.3  9e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  32.26 
 
 
406 aa  84.3  0.000000000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  26.4 
 
 
687 aa  84.3  0.000000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  30.2 
 
 
306 aa  84  0.000000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  27.69 
 
 
573 aa  84  0.000000000000005  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  28.76 
 
 
445 aa  83.6  0.000000000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  25.85 
 
 
701 aa  83.6  0.000000000000006  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  30 
 
 
463 aa  83.6  0.000000000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  26.11 
 
 
699 aa  83.2  0.000000000000007  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  26.11 
 
 
699 aa  83.2  0.000000000000007  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  27.91 
 
 
732 aa  82.8  0.000000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  26.23 
 
 
495 aa  82.4  0.00000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  26.72 
 
 
503 aa  82.8  0.00000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  29.49 
 
 
404 aa  82.4  0.00000000000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  28.07 
 
 
625 aa  81.6  0.00000000000002  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  31.19 
 
 
436 aa  81.6  0.00000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  26.95 
 
 
481 aa  81.3  0.00000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  27.8 
 
 
419 aa  81.3  0.00000000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  28.08 
 
 
538 aa  81.3  0.00000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  26.95 
 
 
481 aa  80.9  0.00000000000004  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  26.68 
 
 
443 aa  80.9  0.00000000000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  32.26 
 
 
676 aa  80.5  0.00000000000005  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  28.74 
 
 
414 aa  80.5  0.00000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
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