More than 300 homologs were found in PanDaTox collection
for query gene Xcel_1025 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_1025  cell envelope-related transcriptional attenuator  100 
 
 
434 aa  849    Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.11457  n/a   
 
 
-
 
NC_013530  Xcel_1026  cell envelope-related transcriptional attenuator  64.46 
 
 
402 aa  389  1e-107  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.999724  n/a   
 
 
-
 
NC_014151  Cfla_3214  cell envelope-related transcriptional attenuator  47.57 
 
 
443 aa  342  1e-92  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00000235319 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  42.9 
 
 
417 aa  266  7e-70  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  44.6 
 
 
396 aa  250  4e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  41.67 
 
 
365 aa  249  9e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  40 
 
 
395 aa  246  6e-64  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  42.65 
 
 
442 aa  241  2e-62  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  38.57 
 
 
391 aa  232  8.000000000000001e-60  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  39.23 
 
 
389 aa  218  2e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_012669  Bcav_3844  cell envelope-related protein transcriptional attenuator  40.41 
 
 
373 aa  213  4.9999999999999996e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0589  putative transcriptional regulator  31.13 
 
 
498 aa  191  2.9999999999999997e-47  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.581304 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  37.07 
 
 
506 aa  187  3e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013521  Sked_00540  cell envelope-related function transcriptional attenuator common domain protein  40.24 
 
 
357 aa  172  1e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.916603  normal  0.105126 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  34.83 
 
 
400 aa  171  2e-41  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  36.08 
 
 
584 aa  168  1e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  35.71 
 
 
468 aa  168  2e-40  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  36.75 
 
 
379 aa  168  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  33.14 
 
 
478 aa  163  7e-39  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  32.85 
 
 
406 aa  161  3e-38  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  32.27 
 
 
453 aa  160  5e-38  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  33.43 
 
 
643 aa  159  8e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  36.96 
 
 
481 aa  156  6e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  33.96 
 
 
520 aa  155  1e-36  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  29.97 
 
 
618 aa  150  4e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  30.17 
 
 
530 aa  145  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  33.14 
 
 
480 aa  142  9.999999999999999e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  31.46 
 
 
481 aa  137  3.0000000000000003e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  31.21 
 
 
395 aa  135  1.9999999999999998e-30  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  32.78 
 
 
487 aa  132  1.0000000000000001e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  29.54 
 
 
540 aa  132  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  30.06 
 
 
521 aa  132  2.0000000000000002e-29  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  32.3 
 
 
504 aa  129  1.0000000000000001e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  32.17 
 
 
509 aa  126  7e-28  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  32.44 
 
 
549 aa  126  9e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  28.86 
 
 
468 aa  124  5e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.91 
 
 
505 aa  121  3e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  31.07 
 
 
465 aa  120  4.9999999999999996e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  31.2 
 
 
497 aa  118  1.9999999999999998e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  29.77 
 
 
734 aa  116  1.0000000000000001e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  31.19 
 
 
499 aa  114  3e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  34.77 
 
 
365 aa  110  5e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  30.06 
 
 
619 aa  110  5e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  30.96 
 
 
491 aa  110  6e-23  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  34.1 
 
 
311 aa  107  3e-22  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  34.1 
 
 
311 aa  107  3e-22  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  34.1 
 
 
311 aa  107  3e-22  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  30.68 
 
 
377 aa  102  1e-20  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  27.83 
 
 
393 aa  101  2e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  30.07 
 
 
512 aa  100  4e-20  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  30.6 
 
 
551 aa  100  7e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  27.94 
 
 
521 aa  99.8  9e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  29.03 
 
 
522 aa  99.4  1e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  31.43 
 
 
349 aa  99.4  1e-19  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  28.85 
 
 
699 aa  98.6  2e-19  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  28.85 
 
 
699 aa  98.6  2e-19  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  28.85 
 
 
701 aa  98.6  2e-19  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  30.03 
 
 
404 aa  97.4  4e-19  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  31.88 
 
 
516 aa  97.1  6e-19  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  30.21 
 
 
625 aa  96.3  1e-18  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  28.82 
 
 
394 aa  95.1  2e-18  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  27.61 
 
 
732 aa  95.1  2e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  28.12 
 
 
538 aa  94.7  3e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  30.39 
 
 
512 aa  94.4  3e-18  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  35.57 
 
 
336 aa  94  5e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  30.26 
 
 
573 aa  93.6  5e-18  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  27.75 
 
 
410 aa  94  5e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  31.14 
 
 
676 aa  92.4  1e-17  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  29.6 
 
 
381 aa  91.7  2e-17  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  29.46 
 
 
405 aa  91.3  3e-17  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  29.01 
 
 
486 aa  91.3  3e-17  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  27.73 
 
 
649 aa  91.3  3e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  30 
 
 
390 aa  90.9  4e-17  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  27.92 
 
 
362 aa  90.5  5e-17  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  29.15 
 
 
419 aa  90.5  5e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  26.4 
 
 
684 aa  90.5  5e-17  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  30.07 
 
 
520 aa  90.1  7e-17  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  26.88 
 
 
687 aa  90.1  7e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  27.36 
 
 
567 aa  89  1e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  27.27 
 
 
420 aa  89.4  1e-16  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  32.34 
 
 
382 aa  89  2e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  27.34 
 
 
414 aa  88.2  3e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  29 
 
 
306 aa  88.2  3e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  29.37 
 
 
374 aa  87.4  4e-16  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  27.81 
 
 
409 aa  86.7  7e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  26.95 
 
 
414 aa  85.9  0.000000000000001  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  28.62 
 
 
495 aa  84.7  0.000000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  31.58 
 
 
455 aa  84.3  0.000000000000004  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  28.03 
 
 
503 aa  84.3  0.000000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  29.25 
 
 
1336 aa  84  0.000000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  28.92 
 
 
517 aa  83.6  0.000000000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  28.32 
 
 
502 aa  83.2  0.000000000000008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  30.31 
 
 
414 aa  82.8  0.00000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  27.45 
 
 
344 aa  81.3  0.00000000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  28.69 
 
 
307 aa  81.3  0.00000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  24.59 
 
 
563 aa  81.3  0.00000000000003  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  26.87 
 
 
404 aa  81.6  0.00000000000003  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  27.68 
 
 
445 aa  80.9  0.00000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  32.54 
 
 
403 aa  80.9  0.00000000000004  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  29.6 
 
 
545 aa  80.1  0.00000000000006  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>