197 homologs were found in PanDaTox collection
for query gene TK90_0664 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_0664  ANTAR domain protein with unknown sensor  100 
 
 
441 aa  884    Thioalkalivibrio sp. K90mix  Bacteria  normal  0.293281  normal  0.015345 
 
 
-
 
NC_009832  Spro_2910  response regulator receiver/ANTAR domain-containing protein  45.77 
 
 
426 aa  312  5.999999999999999e-84  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3521  ANTAR domain protein with unknown sensor  43.79 
 
 
426 aa  310  2.9999999999999997e-83  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1708  response regulator receiver/ANTAR domain-containing protein  42.49 
 
 
431 aa  305  1.0000000000000001e-81  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.667897 
 
 
-
 
NC_012880  Dd703_2508  ANTAR domain protein with unknown sensor  47.87 
 
 
427 aa  296  4e-79  Dickeya dadantii Ech703  Bacteria  normal  0.102211  n/a   
 
 
-
 
NC_013421  Pecwa_1538  ANTAR domain protein with unknown sensor  43.43 
 
 
429 aa  296  6e-79  Pectobacterium wasabiae WPP163  Bacteria  normal  0.585588  n/a   
 
 
-
 
NC_010002  Daci_2378  response regulator receiver/ANTAR domain-containing protein  44.55 
 
 
421 aa  292  9e-78  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2735  ANTAR domain protein with unknown sensor  43.16 
 
 
429 aa  290  3e-77  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0721448  n/a   
 
 
-
 
NC_012912  Dd1591_1437  ANTAR domain protein with unknown sensor  44.06 
 
 
429 aa  287  2e-76  Dickeya zeae Ech1591  Bacteria  normal  0.997771  n/a   
 
 
-
 
NC_008740  Maqu_0174  response regulator receiver/ANTAR domain-containing protein  38.95 
 
 
432 aa  278  2e-73  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1141  ANTAR domain protein with unknown sensor  42.33 
 
 
462 aa  253  6e-66  Thauera sp. MZ1T  Bacteria  normal  0.160464  n/a   
 
 
-
 
NC_013422  Hneap_1118  ANTAR domain protein with unknown sensor  38.31 
 
 
427 aa  252  1e-65  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03665  nitrate-and nitrite-responsive positive regulator  34.39 
 
 
446 aa  240  4e-62  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6603  response regulator receiver/ANTAR domain-containing protein  38.41 
 
 
451 aa  236  4e-61  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.684771 
 
 
-
 
NC_008062  Bcen_5756  response regulator receiver/ANTAR domain-containing protein  39.05 
 
 
451 aa  236  5.0000000000000005e-61  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.874095  n/a   
 
 
-
 
NC_008544  Bcen2424_6121  response regulator receiver/ANTAR domain-containing protein  39.05 
 
 
451 aa  236  5.0000000000000005e-61  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.131957 
 
 
-
 
NC_009436  Ent638_2326  response regulator receiver/ANTAR domain-containing protein  32.66 
 
 
394 aa  190  5e-47  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0329  response regulator receiver/ANTAR domain-containing protein  31.16 
 
 
464 aa  176  6e-43  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
720 aa  111  2.0000000000000002e-23  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0377  Nitrate and nitrite sensing domain protein  29.41 
 
 
661 aa  104  3e-21  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.000413313  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  27.47 
 
 
653 aa  103  5e-21  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  29.28 
 
 
664 aa  100  5e-20  Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  28.24 
 
 
664 aa  97.8  3e-19  Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  29.01 
 
 
662 aa  97.4  4e-19  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  28.68 
 
 
664 aa  96.7  7e-19  Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  27.27 
 
 
666 aa  95.9  1e-18  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  28.3 
 
 
653 aa  95.5  2e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  25.86 
 
 
720 aa  94.4  4e-18  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  29.63 
 
 
664 aa  94  4e-18  Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  29.22 
 
 
664 aa  93.2  8e-18  Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  28.81 
 
 
664 aa  92.8  1e-17  Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  29.08 
 
 
661 aa  92.4  2e-17  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  27.91 
 
 
664 aa  92.4  2e-17  Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  27.49 
 
 
658 aa  90.1  6e-17  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_003910  CPS_0763  methyl-accepting chemotaxis protein  27.38 
 
 
661 aa  89.4  1e-16  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  26.07 
 
 
664 aa  89.7  1e-16  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4364  methyl-accepting chemotaxis sensory transducer  33.68 
 
 
694 aa  85.1  0.000000000000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  27.31 
 
 
662 aa  85.1  0.000000000000002  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_011757  Mchl_4261  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
679 aa  84.7  0.000000000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.131059  normal  0.834811 
 
 
-
 
NC_010505  Mrad2831_1563  methyl-accepting chemotaxis sensory transducer  31.73 
 
 
682 aa  84.3  0.000000000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.543621  normal  0.0909129 
 
 
-
 
NC_007298  Daro_3695  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  28.81 
 
 
930 aa  84  0.000000000000005  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1114  methyl-accepting chemotaxis sensory transducer  30.34 
 
 
700 aa  81.6  0.00000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.655641 
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  25.38 
 
 
664 aa  81.3  0.00000000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_009952  Dshi_1661  transcription antitermination regulatory protein  62.9 
 
 
194 aa  80.1  0.00000000000007  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00275655 
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  27.94 
 
 
664 aa  79.7  0.00000000000009  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_007778  RPB_1762  response regulator receiver/ANTAR domain-containing protein  46.84 
 
 
194 aa  79.3  0.0000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.48447  normal  0.0125916 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  28.3 
 
 
653 aa  79  0.0000000000001  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  27.38 
 
 
668 aa  77.4  0.0000000000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3893  nitrate and nitrite sensing domain-containing protein  32.45 
 
 
679 aa  76.6  0.0000000000008  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.252207 
 
 
-
 
NC_009511  Swit_1703  response regulator receiver/ANTAR domain-containing protein  50 
 
 
193 aa  76.6  0.0000000000008  Sphingomonas wittichii RW1  Bacteria  normal  0.242071  normal 
 
 
-
 
NC_012912  Dd1591_1251  methyl-accepting chemotaxis sensory transducer  30.58 
 
 
646 aa  74.3  0.000000000004  Dickeya zeae Ech1591  Bacteria  normal  0.457093  n/a   
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  43.04 
 
 
194 aa  73.9  0.000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  55.56 
 
 
195 aa  72.8  0.00000000001  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_010505  Mrad2831_2302  response regulator receiver/ANTAR domain-containing protein  45.12 
 
 
195 aa  73.2  0.00000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.874561 
 
 
-
 
NC_012917  PC1_0413  methyl-accepting chemotaxis sensory transducer  25.41 
 
 
653 aa  72  0.00000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  53.97 
 
 
195 aa  72  0.00000000002  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  53.97 
 
 
195 aa  72  0.00000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  44.3 
 
 
195 aa  71.2  0.00000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  45.88 
 
 
195 aa  70.5  0.00000000005  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  43.04 
 
 
207 aa  70.5  0.00000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  53.23 
 
 
196 aa  70.5  0.00000000006  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  41.77 
 
 
196 aa  70.5  0.00000000006  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  37.97 
 
 
194 aa  69.3  0.0000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  55.88 
 
 
206 aa  69.3  0.0000000001  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_008687  Pden_4455  response regulator receiver/ANTAR domain-containing protein  34.03 
 
 
196 aa  69.3  0.0000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.269789  normal 
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  55.88 
 
 
206 aa  69.3  0.0000000001  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_010717  PXO_01489  histidine kinase/response regulator hybrid protein  56.72 
 
 
83 aa  68.6  0.0000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  52.38 
 
 
204 aa  68.9  0.0000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_012880  Dd703_2657  methyl-accepting chemotaxis sensory transducer  27.41 
 
 
646 aa  68.6  0.0000000002  Dickeya dadantii Ech703  Bacteria  normal  0.653915  n/a   
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  52.38 
 
 
202 aa  68.6  0.0000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_009720  Xaut_1086  response regulator receiver/ANTAR domain-containing protein  40.51 
 
 
202 aa  68.2  0.0000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  29.63 
 
 
196 aa  67.4  0.0000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_013421  Pecwa_0492  methyl-accepting chemotaxis sensory transducer  25.19 
 
 
649 aa  65.9  0.000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1262  response regulator receiver/ANTAR domain-containing protein  45.12 
 
 
193 aa  65.5  0.000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.425993  normal 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  33.83 
 
 
191 aa  65.1  0.000000003  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_007404  Tbd_2271  response regulator receiver domain-containing protein  34.43 
 
 
188 aa  64.3  0.000000004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.187486  normal 
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  43.55 
 
 
221 aa  64.3  0.000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_007794  Saro_2973  response regulator receiver/ANTAR domain-containing protein  41.25 
 
 
217 aa  63.5  0.000000007  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1091  diguanylate cyclase/phosphodiesterase  26.41 
 
 
768 aa  63.5  0.000000008  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.107307  normal 
 
 
-
 
NC_004578  PSPTO_2306  response regulator NasT  47.06 
 
 
191 aa  62.4  0.00000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2959  response regulator receiver/ANTAR domain-containing protein  34.97 
 
 
192 aa  62.8  0.00000001  Caulobacter sp. K31  Bacteria  normal  normal  0.793007 
 
 
-
 
NC_007005  Psyr_2104  response regulator receiver:ANTAR  42.53 
 
 
191 aa  61.6  0.00000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00575971 
 
 
-
 
NC_008781  Pnap_1415  response regulator receiver/ANTAR domain-containing protein  31.82 
 
 
210 aa  61.2  0.00000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.609776  normal  0.778661 
 
 
-
 
NC_010581  Bind_1968  response regulator receiver/ANTAR domain-containing protein  50 
 
 
193 aa  60.8  0.00000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  50.79 
 
 
210 aa  61.2  0.00000004  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_008752  Aave_2149  response regulator receiver/ANTAR domain-containing protein  43.75 
 
 
208 aa  60.8  0.00000005  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2589  Fis family transcriptional regulator  50 
 
 
208 aa  60.8  0.00000005  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0488842 
 
 
-
 
NC_011666  Msil_3768  response regulator receiver and ANTAR domain protein  48.1 
 
 
195 aa  60.1  0.00000008  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009052  Sbal_1924  methyl-accepting chemotaxis sensory transducer  27.74 
 
 
531 aa  59.7  0.00000009  Shewanella baltica OS155  Bacteria  normal  0.666083  n/a   
 
 
-
 
NC_003910  CPS_3317  putative response regulator NasT  31.54 
 
 
201 aa  59.7  0.0000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.0234612  n/a   
 
 
-
 
NC_007492  Pfl01_1784  response regulator receiver  45.59 
 
 
191 aa  59.3  0.0000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0769  response regulator receiver/ANTAR domain-containing protein  42.25 
 
 
214 aa  59.3  0.0000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0679202  n/a   
 
 
-
 
NC_007908  Rfer_2553  response regulator receiver/ANTAR domain-containing protein  48.53 
 
 
215 aa  59.7  0.0000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2093  response regulator receiver and ANTAR domain protein  44.12 
 
 
191 aa  58.5  0.0000002  Pseudomonas putida KT2440  Bacteria  normal  0.966349  normal  0.0833699 
 
 
-
 
NC_007948  Bpro_3266  response regulator receiver/ANTAR domain-containing protein  45.59 
 
 
210 aa  58.9  0.0000002  Polaromonas sp. JS666  Bacteria  normal  0.559806  normal 
 
 
-
 
NC_010322  PputGB1_1604  response regulator receiver/ANTAR domain-containing protein  44.12 
 
 
191 aa  58.5  0.0000002  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0284464 
 
 
-
 
NC_009512  Pput_3647  response regulator receiver/ANTAR domain-containing protein  44.12 
 
 
191 aa  58.5  0.0000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3805  putative sensor with HAMP domain  25.5 
 
 
821 aa  57.4  0.0000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1611  response regulator receiver/ANTAR domain-containing protein  44.12 
 
 
191 aa  57.8  0.0000004  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000000101988 
 
 
-
 
NC_012560  Avin_23450  response regulator NasT  42.65 
 
 
192 aa  57.8  0.0000004  Azotobacter vinelandii DJ  Bacteria  normal  0.212044  n/a   
 
 
-
 
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