Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4455 |
Symbol | |
ID | 4583005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1666776 |
End bp | 1667366 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771762 |
Product | response regulator receiver/ANTAR domain-containing protein |
Protein accession | YP_918215 |
Protein GI | 119387160 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3707] Response regulator with putative antiterminator output domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.269789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAAGC GCCTTTCGAT CGTCGTCATC GAATCCGACC CGGAGCGCGC CGCCCCGATC GTGGACGGGC TGCGCGAGAT CGGCGACCAC GACATCCGCA TCATCTCGGA AGAAACCGGC CTCGCGCGCC ACATCGCCGA ATGCCGGCCC GACATCGTGC TGATCGACCT GGCCAATCCC TCGCGCGACG TGCTCGAAGA GCTGGCGCTG GCCTCGGGCC CGACCGAGCG GCCGGTGGCG ATGTTCGTGG ACCGCTCGGA TGAGCATCTG ACGCGCGCTG CGGTCGAGGC GGGGATATCG GCCTATGTCG TGGACGGGCT GCGTCCCGAC CGGATCAAGC CGGTGCTGGA TGCGGCCATC GCACGCTTTC ACATGTTCCA GCGCATGCGG GCCGAACTGG CCGCGACCCG CGCGGCATTG GAGGAGCGCA AGGTGATCGA CCGCGCCAAG GCCGTGCTGA TGAAGGCGCG CGGCATCGAC GAAGAGGCCG CCTATGCGCT GTTGCGCAAG ACGGCGATGG ACCAGGGCAA GCGCGTGGCC GAGATCGCGC AACAGCTGGT CCTTGCCGCG GGGTTGCTCT CATGCCGTTG A
|
Protein sequence | MDKRLSIVVI ESDPERAAPI VDGLREIGDH DIRIISEETG LARHIAECRP DIVLIDLANP SRDVLEELAL ASGPTERPVA MFVDRSDEHL TRAAVEAGIS AYVVDGLRPD RIKPVLDAAI ARFHMFQRMR AELAATRAAL EERKVIDRAK AVLMKARGID EEAAYALLRK TAMDQGKRVA EIAQQLVLAA GLLSCR
|
| |