Gene Pden_4455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4455 
Symbol 
ID4583005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1666776 
End bp1667366 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content68% 
IMG OID639771762 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_918215 
Protein GI119387160 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.269789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC GCCTTTCGAT CGTCGTCATC GAATCCGACC CGGAGCGCGC CGCCCCGATC 
GTGGACGGGC TGCGCGAGAT CGGCGACCAC GACATCCGCA TCATCTCGGA AGAAACCGGC
CTCGCGCGCC ACATCGCCGA ATGCCGGCCC GACATCGTGC TGATCGACCT GGCCAATCCC
TCGCGCGACG TGCTCGAAGA GCTGGCGCTG GCCTCGGGCC CGACCGAGCG GCCGGTGGCG
ATGTTCGTGG ACCGCTCGGA TGAGCATCTG ACGCGCGCTG CGGTCGAGGC GGGGATATCG
GCCTATGTCG TGGACGGGCT GCGTCCCGAC CGGATCAAGC CGGTGCTGGA TGCGGCCATC
GCACGCTTTC ACATGTTCCA GCGCATGCGG GCCGAACTGG CCGCGACCCG CGCGGCATTG
GAGGAGCGCA AGGTGATCGA CCGCGCCAAG GCCGTGCTGA TGAAGGCGCG CGGCATCGAC
GAAGAGGCCG CCTATGCGCT GTTGCGCAAG ACGGCGATGG ACCAGGGCAA GCGCGTGGCC
GAGATCGCGC AACAGCTGGT CCTTGCCGCG GGGTTGCTCT CATGCCGTTG A
 
Protein sequence
MDKRLSIVVI ESDPERAAPI VDGLREIGDH DIRIISEETG LARHIAECRP DIVLIDLANP 
SRDVLEELAL ASGPTERPVA MFVDRSDEHL TRAAVEAGIS AYVVDGLRPD RIKPVLDAAI
ARFHMFQRMR AELAATRAAL EERKVIDRAK AVLMKARGID EEAAYALLRK TAMDQGKRVA
EIAQQLVLAA GLLSCR