Gene BBta_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4139 
Symbol 
ID5152345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4346181 
End bp4346771 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content62% 
IMG OID640558969 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_001240107 
Protein GI148255522 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.214536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG AGCAATCGCC TAAAATCGTG ATCGTCGACG AGAGCCCGAT CCGCGCGGCC 
ATCCTGGAGG AGGGCTTGCG GGAGGCGGGT TTTACCGGCG TGGTGCATGT CAGCGAGATG
CAGGGCCTGC TGGCGCGGAT CTACGCGCTC GACCCTGACG TCATCGTCAT CGACCTGGAG
AACCCGAGCC GCGACGTGCT TGAGCAGATG TTTCAGGTCA GCCGCGCGGT CCGTCGGCCC
ATCGCCATGT TCGTGGACCA GAGCGACGCC GCCTCGATCC AGGCCTCGGT GGAAGCCGGC
GTGTCGGCCT ACATCGTCGA CGGGCTGAAG AAGGAGCGGA TCAAGCCGAT CCTCGACCTC
TGCATCTCCC GGTTCAATGC GTTCTCGAAG CTGCAGGATG AGCTCGAGCG CGCCAAATCG
GCCCTCGAGG ATCGCAAGGT GATCGACCGC GCCAAAGGCA TTCTGATGAA GATGAAAGGC
TTCACTGAAG AGGAGGCCTA CGTGCTGTTG CGCTCCACGG CGATGCGCGA GAAGAAGAAG
ATCGGCGAGA TCGCGCAATC GATCCTGACC GCCTCGGAGA TGCTGAAATG A
 
Protein sequence
MSAEQSPKIV IVDESPIRAA ILEEGLREAG FTGVVHVSEM QGLLARIYAL DPDVIVIDLE 
NPSRDVLEQM FQVSRAVRRP IAMFVDQSDA ASIQASVEAG VSAYIVDGLK KERIKPILDL
CISRFNAFSK LQDELERAKS ALEDRKVIDR AKGILMKMKG FTEEEAYVLL RSTAMREKKK
IGEIAQSILT ASEMLK