Gene RPB_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1762 
Symbol 
ID3909749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2016085 
End bp2016669 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content62% 
IMG OID637883656 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_485381 
Protein GI86748885 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.48447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0125916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGC TGCTGAAAAT CGTGATCGTC GACGAGAACC CGGTGCGTGC CGGGATTCTC 
ACCGAGGGGC TGCGCGAGGC CGGGATGTCG CAGATCACCT ATCTGGCCGC GACCACCAAC
CTGCTGGCGC GGATCTACGA GATCGACCCC GACGTCATCC TGATCGATCT GGAGAACCCA
AGCCGCGACA TGCTGGAGCA GATGTTCCAG GTCAGCCGCA TCGTGAAGCG GCCGATCGCG
ATGTTCGTCG ACCAGAGCGA CACCGCCTCG ATCCAGGCCT CGGTCGACGC CGGCGTCTCG
GCCTATATCG TCGACGGGCT GAAAAAGGAG CGAATGAAGC ACATCCTCGA CCTGTGCATC
TCGCGCTTCA ACGCCTTCGC CCATCTCGAG ACTGAACTGC ACCGCGCCCG CAGCGCGCTG
GACGATCGCA AGGTGATCGA CCGCGCCAAG GGCATTCTGA TGAAGGCCAA GGGCCTGACC
GAAGAGCAGG CCTATGTGCT GCTGCGGACG ACGGCCATGA ACGAGAAGAA GAAAATCGCC
GAGATCGCCC AGTCGGTGGT CACCGCGTCG GAGATGCTGA AATGA
 
Protein sequence
MDPLLKIVIV DENPVRAGIL TEGLREAGMS QITYLAATTN LLARIYEIDP DVILIDLENP 
SRDMLEQMFQ VSRIVKRPIA MFVDQSDTAS IQASVDAGVS AYIVDGLKKE RMKHILDLCI
SRFNAFAHLE TELHRARSAL DDRKVIDRAK GILMKAKGLT EEQAYVLLRT TAMNEKKKIA
EIAQSVVTAS EMLK