Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1762 |
Symbol | |
ID | 3909749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 2016085 |
End bp | 2016669 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637883656 |
Product | response regulator receiver/ANTAR domain-containing protein |
Protein accession | YP_485381 |
Protein GI | 86748885 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3707] Response regulator with putative antiterminator output domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.48447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0125916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCCGC TGCTGAAAAT CGTGATCGTC GACGAGAACC CGGTGCGTGC CGGGATTCTC ACCGAGGGGC TGCGCGAGGC CGGGATGTCG CAGATCACCT ATCTGGCCGC GACCACCAAC CTGCTGGCGC GGATCTACGA GATCGACCCC GACGTCATCC TGATCGATCT GGAGAACCCA AGCCGCGACA TGCTGGAGCA GATGTTCCAG GTCAGCCGCA TCGTGAAGCG GCCGATCGCG ATGTTCGTCG ACCAGAGCGA CACCGCCTCG ATCCAGGCCT CGGTCGACGC CGGCGTCTCG GCCTATATCG TCGACGGGCT GAAAAAGGAG CGAATGAAGC ACATCCTCGA CCTGTGCATC TCGCGCTTCA ACGCCTTCGC CCATCTCGAG ACTGAACTGC ACCGCGCCCG CAGCGCGCTG GACGATCGCA AGGTGATCGA CCGCGCCAAG GGCATTCTGA TGAAGGCCAA GGGCCTGACC GAAGAGCAGG CCTATGTGCT GCTGCGGACG ACGGCCATGA ACGAGAAGAA GAAAATCGCC GAGATCGCCC AGTCGGTGGT CACCGCGTCG GAGATGCTGA AATGA
|
Protein sequence | MDPLLKIVIV DENPVRAGIL TEGLREAGMS QITYLAATTN LLARIYEIDP DVILIDLENP SRDMLEQMFQ VSRIVKRPIA MFVDQSDTAS IQASVDAGVS AYIVDGLKKE RMKHILDLCI SRFNAFAHLE TELHRARSAL DDRKVIDRAK GILMKAKGLT EEQAYVLLRT TAMNEKKKIA EIAQSVVTAS EMLK
|
| |