| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1661 |
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| Symbol | |
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| ID | 5713226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1726594 |
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| End bp | 1727178 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267577 |
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| Product | transcription antitermination regulatory protein |
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| Protein accession | YP_001533004 |
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| Protein GI | 159044210 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00275655 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGAAGC CCCTCAAGAT ACTCGTGGTA GAGCCTGATG AATCCCGTGC GCGGATGATC
ATGGATGGCC TTGCGGAAGC TGGCGAGGCG GAAGTGATGG TGCTCGGGTC TGCGACAGGG
CTTGCGCGGC ACATGGCGGA ACTGGGACCG GACGTCGTGT TGATCGCCAT GTCGAACCCC
TCTCGCGATA CGCTCGAAGC GCTCAGTGTG GCCTCCGGCT TCAACGAGCG ACCGGTGGCA
ATGTTCGTGG ACCGCTCTGA CGATGCCACG ACGCGCGCGG CCATCGAGGC AGGCGTCAGC
GCGTATGTCG TGGACGGACT GCACAAGGAA CGTATCAAGC CGATCCTCGA TGCCGCTATT
GCGCGGTTCA ACATGTTCGC CCGGTTGCGT ACCGAGCTTG CCGCGGCCAA GACCGCTCTC
GCCGAGCGCA AGACGATCGA ACGGGCGAAG GGCCTGCTGA TGACCGCGAA AGGGATCACC
GAAGACCAAG CCTATGCCAT TCTGCGCAAG ACCGCGATGG ATCAGGGCCG GAAGGTCTCC
GAAGTCGCCG AAGCACTGGT CACAGCGTCG GACATGTTGC GATGA
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| Protein sequence | MPKPLKILVV EPDESRARMI MDGLAEAGEA EVMVLGSATG LARHMAELGP DVVLIAMSNP
SRDTLEALSV ASGFNERPVA MFVDRSDDAT TRAAIEAGVS AYVVDGLHKE RIKPILDAAI
ARFNMFARLR TELAAAKTAL AERKTIERAK GLLMTAKGIT EDQAYAILRK TAMDQGRKVS
EVAEALVTAS DMLR
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