| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1611 |
|---|
| Symbol | |
|---|
| ID | 6110556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1786344 |
|---|
| End bp | 1786919 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641621402 |
|---|
| Product | response regulator receiver/ANTAR domain-containing protein |
|---|
| Protein accession | YP_001748485 |
|---|
| Protein GI | 170720797 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000000101988 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCA TCCTGCTGAT CGACGATACC CAGAACAAGC TCGGCCGCCT CAAGGCTGCA
CTGCGCGAAG CCGGCTTCGA GGTGATCGAG GCGCCAGACC TGACCATCGA CCTGCCCGCC
TGCGTCGAAA TGGTGCGCCC GGACGTGGTG TTGATCGATA CCGATTCACC CGACCGCGAC
GTGATGGAAC AGGTAGTAAT GGTGAGCCGC GACCAGCCGC GGCCGATTGT GCTGTTCACC
GACGAGCATG ACCCGGGGGT GATGCGCCAG GCGATCCAGG CCGGGGTCAG CGCGTACATC
GTCGAGGGCA TCCACGCCGC CCGCTTGCAG CCAATCCTGG ACGTGGCCAT GGCCCGCTTC
GAGAGCGATC AGGCGCTCAG GGCCCAGCTG CTGGCCCGCG ACCAGCAACT GGCCGAACGC
AAGCGCATCG AGCAGGCCAA GGGTCTGCTG ATGAAAATGA AAGACTGCAA CGAAGAACAG
GCTTACACCC TGATGCGCCG GCAGGCCATG AGCCGCCAGC AGAAGCTGAT CCAGGTGGCA
GAGCAGATCA TCGCCATGCA CGAGATGCTG GGGTAA
|
|---|
| Protein sequence | MLRILLIDDT QNKLGRLKAA LREAGFEVIE APDLTIDLPA CVEMVRPDVV LIDTDSPDRD
VMEQVVMVSR DQPRPIVLFT DEHDPGVMRQ AIQAGVSAYI VEGIHAARLQ PILDVAMARF
ESDQALRAQL LARDQQLAER KRIEQAKGLL MKMKDCNEEQ AYTLMRRQAM SRQQKLIQVA
EQIIAMHEML G
|
|---|
| |