More than 300 homologs were found in PanDaTox collection
for query gene PputW619_1611 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_1611  response regulator receiver/ANTAR domain-containing protein  100 
 
 
191 aa  380  1e-105  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000000101988 
 
 
-
 
NC_010322  PputGB1_1604  response regulator receiver/ANTAR domain-containing protein  97.91 
 
 
191 aa  374  1e-103  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0284464 
 
 
-
 
NC_002947  PP_2093  response regulator receiver and ANTAR domain protein  95.81 
 
 
191 aa  368  1e-101  Pseudomonas putida KT2440  Bacteria  normal  0.966349  normal  0.0833699 
 
 
-
 
NC_009512  Pput_3647  response regulator receiver/ANTAR domain-containing protein  95.81 
 
 
191 aa  368  1e-101  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1784  response regulator receiver  87.43 
 
 
191 aa  333  7.999999999999999e-91  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2581  response regulator receiver/ANTAR domain-containing protein  85.86 
 
 
192 aa  327  9e-89  Pseudomonas mendocina ymp  Bacteria  normal  0.298585  hitchhiker  0.00648362 
 
 
-
 
NC_004578  PSPTO_2306  response regulator NasT  85.34 
 
 
191 aa  323  8.000000000000001e-88  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2104  response regulator receiver:ANTAR  84.82 
 
 
191 aa  320  9.999999999999999e-87  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00575971 
 
 
-
 
NC_008463  PA14_41490  hypothetical protein  83.25 
 
 
192 aa  316  1e-85  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_23450  response regulator NasT  82.72 
 
 
192 aa  316  1e-85  Azotobacter vinelandii DJ  Bacteria  normal  0.212044  n/a   
 
 
-
 
NC_009656  PSPA7_3519  hypothetical protein  81.15 
 
 
192 aa  312  9.999999999999999e-85  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4144  response regulator receiver/ANTAR domain-containing protein  45.9 
 
 
201 aa  164  5e-40  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.071014 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  44.44 
 
 
191 aa  164  5.9999999999999996e-40  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  43.68 
 
 
191 aa  162  3e-39  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_007650  BTH_II1167  response regulator NasT  43.01 
 
 
198 aa  162  3e-39  Burkholderia thailandensis E264  Bacteria  normal  0.136185  n/a   
 
 
-
 
NC_006349  BMAA1090  response regulator NasT  43.01 
 
 
198 aa  162  4.0000000000000004e-39  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0864919  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0246  response regulator NasT  43.01 
 
 
198 aa  162  4.0000000000000004e-39  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0087  response regulator/ANTAR domain-containing protein  43.01 
 
 
198 aa  162  4.0000000000000004e-39  Burkholderia mallei SAVP1  Bacteria  normal  0.792302  n/a   
 
 
-
 
NC_008835  BMA10229_0333  response regulator NasT  43.01 
 
 
198 aa  162  4.0000000000000004e-39  Burkholderia mallei NCTC 10229  Bacteria  normal  0.169956  n/a   
 
 
-
 
NC_009075  BURPS668_A1759  response regulator/ANTAR domain-containing protein  43.01 
 
 
198 aa  162  4.0000000000000004e-39  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1670  response regulator/ANTAR domain-containing protein  43.01 
 
 
198 aa  162  4.0000000000000004e-39  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1255  response regulator/ANTAR domain-containing protein  43.01 
 
 
198 aa  162  4.0000000000000004e-39  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0422038  n/a   
 
 
-
 
NC_010515  Bcenmc03_5794  response regulator receiver/ANTAR domain-containing protein  45.36 
 
 
198 aa  160  1e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4403  response regulator receiver/ANTAR domain-containing protein  45.6 
 
 
198 aa  160  1e-38  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.155669 
 
 
-
 
NC_008391  Bamb_3940  response regulator receiver/ANTAR domain-containing protein  45.6 
 
 
198 aa  160  1e-38  Burkholderia ambifaria AMMD  Bacteria  normal  0.590133  normal 
 
 
-
 
NC_007511  Bcep18194_B1340  response regulator receiver/ANTAR domain-containing protein  44.81 
 
 
198 aa  159  2e-38  Burkholderia sp. 383  Bacteria  normal  normal  0.579049 
 
 
-
 
NC_008061  Bcen_3858  response regulator receiver/ANTAR domain-containing protein  45.36 
 
 
219 aa  159  2e-38  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.853052  n/a   
 
 
-
 
NC_008543  Bcen2424_4510  response regulator receiver/ANTAR domain-containing protein  45.36 
 
 
219 aa  159  2e-38  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.000166869  normal 
 
 
-
 
NC_010623  Bphy_3445  response regulator receiver/ANTAR domain-containing protein  43.78 
 
 
191 aa  157  8e-38  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  40.53 
 
 
224 aa  154  1e-36  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_007404  Tbd_2271  response regulator receiver domain-containing protein  45.36 
 
 
188 aa  152  2e-36  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.187486  normal 
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  41.58 
 
 
191 aa  151  5.9999999999999996e-36  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  41.05 
 
 
191 aa  149  2e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_007347  Reut_A0331  response regulator receiver:ANTAR  43.32 
 
 
214 aa  148  4e-35  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1703  response regulator receiver/ANTAR domain-containing protein  42.93 
 
 
193 aa  147  6e-35  Sphingomonas wittichii RW1  Bacteria  normal  0.242071  normal 
 
 
-
 
NC_007973  Rmet_0278  response regulator receiver/ANTAR domain-containing protein  41.71 
 
 
219 aa  147  7e-35  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1762  response regulator receiver/ANTAR domain-containing protein  40 
 
 
194 aa  147  9e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.48447  normal  0.0125916 
 
 
-
 
NC_012856  Rpic12D_0259  response regulator receiver and ANTAR domain protein  42.25 
 
 
212 aa  147  1.0000000000000001e-34  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  40.21 
 
 
194 aa  146  2.0000000000000003e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_010682  Rpic_0238  response regulator receiver and ANTAR domain protein  41.71 
 
 
212 aa  146  2.0000000000000003e-34  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  38.83 
 
 
195 aa  146  2.0000000000000003e-34  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  40.21 
 
 
194 aa  146  2.0000000000000003e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  37.57 
 
 
196 aa  145  3e-34  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2302  response regulator receiver/ANTAR domain-containing protein  40.84 
 
 
195 aa  145  4.0000000000000006e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.874561 
 
 
-
 
NC_008752  Aave_2149  response regulator receiver/ANTAR domain-containing protein  43.43 
 
 
208 aa  145  4.0000000000000006e-34  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0382  response regulator transcription regulator protein  41.94 
 
 
195 aa  144  6e-34  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.846144 
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  40.31 
 
 
195 aa  144  6e-34  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  39.89 
 
 
196 aa  144  6e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  38.1 
 
 
195 aa  143  1e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  38.1 
 
 
195 aa  143  1e-33  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  39.15 
 
 
221 aa  144  1e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  38.04 
 
 
207 aa  142  2e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  41.14 
 
 
210 aa  142  3e-33  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  38.42 
 
 
195 aa  141  5e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_008786  Veis_2589  Fis family transcriptional regulator  42.29 
 
 
208 aa  141  7e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0488842 
 
 
-
 
NC_009952  Dshi_1661  transcription antitermination regulatory protein  40.21 
 
 
194 aa  140  9.999999999999999e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00275655 
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  42.29 
 
 
206 aa  140  9.999999999999999e-33  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  42.29 
 
 
206 aa  140  9.999999999999999e-33  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  37.89 
 
 
195 aa  139  1.9999999999999998e-32  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3266  response regulator receiver/ANTAR domain-containing protein  41.14 
 
 
210 aa  139  3e-32  Polaromonas sp. JS666  Bacteria  normal  0.559806  normal 
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  37.16 
 
 
196 aa  137  6e-32  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  38.74 
 
 
202 aa  137  7e-32  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_008781  Pnap_1415  response regulator receiver/ANTAR domain-containing protein  41.14 
 
 
210 aa  137  8.999999999999999e-32  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.609776  normal  0.778661 
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  38.74 
 
 
204 aa  136  2e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_007908  Rfer_2553  response regulator receiver/ANTAR domain-containing protein  40.11 
 
 
215 aa  133  1.9999999999999998e-30  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  38.38 
 
 
212 aa  132  3e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4455  response regulator receiver/ANTAR domain-containing protein  37.7 
 
 
196 aa  130  9e-30  Paracoccus denitrificans PD1222  Bacteria  normal  0.269789  normal 
 
 
-
 
NC_010338  Caul_2959  response regulator receiver/ANTAR domain-containing protein  45.14 
 
 
192 aa  130  1.0000000000000001e-29  Caulobacter sp. K31  Bacteria  normal  normal  0.793007 
 
 
-
 
NC_011666  Msil_3768  response regulator receiver and ANTAR domain protein  39.36 
 
 
195 aa  128  5.0000000000000004e-29  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008048  Sala_1262  response regulator receiver/ANTAR domain-containing protein  36.92 
 
 
193 aa  128  5.0000000000000004e-29  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.425993  normal 
 
 
-
 
NC_009720  Xaut_1086  response regulator receiver/ANTAR domain-containing protein  33.33 
 
 
202 aa  127  1.0000000000000001e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3038  response regulator receiver/ANTAR domain-containing protein  34.92 
 
 
206 aa  125  3e-28  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1132  response regulator receiver/ANTAR domain-containing protein  35.33 
 
 
194 aa  125  5e-28  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.169793  n/a   
 
 
-
 
NC_007794  Saro_2973  response regulator receiver/ANTAR domain-containing protein  34.69 
 
 
217 aa  123  1e-27  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3317  putative response regulator NasT  33.68 
 
 
201 aa  122  3e-27  Colwellia psychrerythraea 34H  Bacteria  normal  0.0234612  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  34.18 
 
 
196 aa  103  2e-21  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0769  response regulator receiver/ANTAR domain-containing protein  29.89 
 
 
214 aa  101  5e-21  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0679202  n/a   
 
 
-
 
NC_007948  Bpro_3275  response regulator receiver/ANTAR domain-containing protein  34.06 
 
 
430 aa  99.8  2e-20  Polaromonas sp. JS666  Bacteria  normal  0.197236  normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  33.16 
 
 
196 aa  97.8  8e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1968  response regulator receiver/ANTAR domain-containing protein  35.86 
 
 
193 aa  92  4e-18  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  30.73 
 
 
197 aa  90.9  1e-17  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  30.53 
 
 
198 aa  89.7  2e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_008825  Mpe_A2314  response regulator  30.53 
 
 
426 aa  89.7  2e-17  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  31.94 
 
 
194 aa  87.4  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  33.33 
 
 
200 aa  86.7  2e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  32.73 
 
 
204 aa  86.7  2e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2675  response regulator receiver/ANTAR domain-containing protein  29.71 
 
 
383 aa  85.5  4e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  31.52 
 
 
220 aa  84.3  0.000000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  30.91 
 
 
226 aa  83.6  0.000000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  30.81 
 
 
194 aa  81.3  0.000000000000007  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_008340  Mlg_2590  response regulator receiver/ANTAR domain-containing protein  31.87 
 
 
193 aa  81.3  0.000000000000009  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.0012524 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  26.74 
 
 
191 aa  80.5  0.00000000000001  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  30 
 
 
214 aa  80.9  0.00000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  30.32 
 
 
194 aa  80.9  0.00000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  29.12 
 
 
210 aa  80.1  0.00000000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  29.12 
 
 
210 aa  80.1  0.00000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  30.54 
 
 
206 aa  80.1  0.00000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  29.12 
 
 
210 aa  80.1  0.00000000000002  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  29.47 
 
 
192 aa  79.3  0.00000000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  31.35 
 
 
229 aa  79.7  0.00000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
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