| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_23450 |
|---|
| Symbol | nasT |
|---|
| ID | 7761261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2346144 |
|---|
| End bp | 2346722 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643805227 |
|---|
| Product | response regulator NasT |
|---|
| Protein accession | YP_002799508 |
|---|
| Protein GI | 226944435 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.212044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCA TCCTCCTGAT CAACGACACG CCGAAAAAGG TCGGCCGCCT GAAAAGCGCC
CTGGTCGAGG CCGGCTTCGA AGTCGTCGAC GAGTCCGGCC TGACCATCGA TCTGCCGGTG
CGGGTCGAGG CCGTGCGCCC CGATGTGATC CTCATCGACA CCGAATCTCC CGGCCGCGAC
GTGATGGAGC AGGTGGTACT GGTCAGTCGC GACCGACCAC GCCCGATCGT GATGTTCACC
GACGAGCACG ACCCGCAGGT GATGCGCCAG GCGATCCAGG CCGGGGTCAG CGCCTATATC
GTCGAGGGCA TCCAGGCGCA GCGCCTGCAG CCGATCCTCG ACGTGGCCAT GGCCCGCTTC
GAGAGCGACC AGGCCCTGCG CGCCCAGTTG CAGGCCCGCG AGGCGCAGTT GGCCGAGCGT
AAGCGCGTCG AACTGGCCAA GGGCCTGCTG ATGAAAATGA AGAACTGCAG CGAGGAGGAG
GCCTATACCC TGATGCGCCG CCAGGCCATG AGCCGCCAGC AGAAGCTGAT CCAGGTCGCC
GAGCAGGTCA TCGCCATGCA CGACATGTTG GGAAGCTGA
|
|---|
| Protein sequence | MLRILLINDT PKKVGRLKSA LVEAGFEVVD ESGLTIDLPV RVEAVRPDVI LIDTESPGRD
VMEQVVLVSR DRPRPIVMFT DEHDPQVMRQ AIQAGVSAYI VEGIQAQRLQ PILDVAMARF
ESDQALRAQL QAREAQLAER KRVELAKGLL MKMKNCSEEE AYTLMRRQAM SRQQKLIQVA
EQVIAMHDML GS
|
|---|
| |