196 homologs were found in PanDaTox collection
for query gene PXO_01489 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_01489  histidine kinase/response regulator hybrid protein  100 
 
 
83 aa  161  3e-39  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3445  response regulator receiver/ANTAR domain-containing protein  58.02 
 
 
191 aa  90.1  1e-17  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  59.76 
 
 
191 aa  90.1  1e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_007650  BTH_II1167  response regulator NasT  55.84 
 
 
198 aa  89.4  2e-17  Burkholderia thailandensis E264  Bacteria  normal  0.136185  n/a   
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  58.54 
 
 
191 aa  87.4  6e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
NC_007511  Bcep18194_B1340  response regulator receiver/ANTAR domain-containing protein  53.95 
 
 
198 aa  85.5  2e-16  Burkholderia sp. 383  Bacteria  normal  normal  0.579049 
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  54.32 
 
 
206 aa  85.5  2e-16  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  54.32 
 
 
206 aa  85.5  2e-16  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_008061  Bcen_3858  response regulator receiver/ANTAR domain-containing protein  52.63 
 
 
219 aa  84  6e-16  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.853052  n/a   
 
 
-
 
NC_008543  Bcen2424_4510  response regulator receiver/ANTAR domain-containing protein  52.63 
 
 
219 aa  84  6e-16  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.000166869  normal 
 
 
-
 
NC_010515  Bcenmc03_5794  response regulator receiver/ANTAR domain-containing protein  52.63 
 
 
198 aa  84.3  6e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4144  response regulator receiver/ANTAR domain-containing protein  52.63 
 
 
201 aa  84  7e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.071014 
 
 
-
 
NC_006349  BMAA1090  response regulator NasT  51.95 
 
 
198 aa  83.2  0.000000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0864919  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0246  response regulator NasT  51.95 
 
 
198 aa  83.2  0.000000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3940  response regulator receiver/ANTAR domain-containing protein  53.33 
 
 
198 aa  83.2  0.000000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.590133  normal 
 
 
-
 
NC_008784  BMASAVP1_0087  response regulator/ANTAR domain-containing protein  51.95 
 
 
198 aa  83.2  0.000000000000001  Burkholderia mallei SAVP1  Bacteria  normal  0.792302  n/a   
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  50.62 
 
 
210 aa  83.2  0.000000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_008835  BMA10229_0333  response regulator NasT  51.95 
 
 
198 aa  83.2  0.000000000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.169956  n/a   
 
 
-
 
NC_009075  BURPS668_A1759  response regulator/ANTAR domain-containing protein  51.95 
 
 
198 aa  83.2  0.000000000000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1670  response regulator/ANTAR domain-containing protein  51.95 
 
 
198 aa  83.2  0.000000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1255  response regulator/ANTAR domain-containing protein  51.95 
 
 
198 aa  83.2  0.000000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0422038  n/a   
 
 
-
 
NC_010552  BamMC406_4403  response regulator receiver/ANTAR domain-containing protein  53.33 
 
 
198 aa  83.2  0.000000000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.155669 
 
 
-
 
NC_008752  Aave_2149  response regulator receiver/ANTAR domain-containing protein  51.85 
 
 
208 aa  80.9  0.000000000000005  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1415  response regulator receiver/ANTAR domain-containing protein  49.38 
 
 
210 aa  80.5  0.000000000000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.609776  normal  0.778661 
 
 
-
 
NC_008786  Veis_2589  Fis family transcriptional regulator  51.85 
 
 
208 aa  80.1  0.000000000000009  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0488842 
 
 
-
 
NC_007948  Bpro_3266  response regulator receiver/ANTAR domain-containing protein  49.38 
 
 
210 aa  79.7  0.00000000000001  Polaromonas sp. JS666  Bacteria  normal  0.559806  normal 
 
 
-
 
NC_007908  Rfer_2553  response regulator receiver/ANTAR domain-containing protein  46.59 
 
 
215 aa  75.9  0.0000000000002  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  47.5 
 
 
196 aa  75.1  0.0000000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  46.25 
 
 
191 aa  74.3  0.0000000000006  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_007520  Tcr_0769  response regulator receiver/ANTAR domain-containing protein  45.45 
 
 
214 aa  73.9  0.0000000000007  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0679202  n/a   
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  46.25 
 
 
195 aa  72.4  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  44.44 
 
 
195 aa  72.4  0.000000000002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  43.21 
 
 
195 aa  71.2  0.000000000005  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  43.21 
 
 
195 aa  70.9  0.000000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  42.5 
 
 
191 aa  70.9  0.000000000006  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  44.44 
 
 
202 aa  70.5  0.000000000008  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  43.75 
 
 
207 aa  70.1  0.000000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_012880  Dd703_2508  ANTAR domain protein with unknown sensor  53.73 
 
 
427 aa  69.7  0.00000000001  Dickeya dadantii Ech703  Bacteria  normal  0.102211  n/a   
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  43.21 
 
 
204 aa  70.1  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_009511  Swit_1703  response regulator receiver/ANTAR domain-containing protein  45.68 
 
 
193 aa  68.9  0.00000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.242071  normal 
 
 
-
 
NC_013889  TK90_0664  ANTAR domain protein with unknown sensor  56.72 
 
 
441 aa  68.6  0.00000000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.293281  normal  0.015345 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  42.5 
 
 
196 aa  68.2  0.00000000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1661  transcription antitermination regulatory protein  45 
 
 
194 aa  68.2  0.00000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00275655 
 
 
-
 
NC_009720  Xaut_1086  response regulator receiver/ANTAR domain-containing protein  38.75 
 
 
202 aa  67.8  0.00000000005  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3038  response regulator receiver/ANTAR domain-containing protein  43.9 
 
 
206 aa  67  0.00000000009  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2104  response regulator receiver:ANTAR  43.37 
 
 
191 aa  65.5  0.0000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00575971 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  38.55 
 
 
196 aa  65.9  0.0000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2735  ANTAR domain protein with unknown sensor  57.14 
 
 
429 aa  65.9  0.0000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0721448  n/a   
 
 
-
 
NC_010505  Mrad2831_2302  response regulator receiver/ANTAR domain-containing protein  42.5 
 
 
195 aa  65.1  0.0000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.874561 
 
 
-
 
NC_012912  Dd1591_1437  ANTAR domain protein with unknown sensor  58.18 
 
 
429 aa  64.7  0.0000000004  Dickeya zeae Ech1591  Bacteria  normal  0.997771  n/a   
 
 
-
 
NC_013421  Pecwa_1538  ANTAR domain protein with unknown sensor  58.18 
 
 
429 aa  64.3  0.0000000005  Pectobacterium wasabiae WPP163  Bacteria  normal  0.585588  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  39.47 
 
 
198 aa  64.3  0.0000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  39.51 
 
 
196 aa  64.3  0.0000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2306  response regulator NasT  42.17 
 
 
191 aa  63.9  0.0000000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  37.5 
 
 
196 aa  63.9  0.0000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_007492  Pfl01_1784  response regulator receiver  43.21 
 
 
191 aa  63.5  0.0000000009  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4455  response regulator receiver/ANTAR domain-containing protein  44.44 
 
 
196 aa  63.5  0.000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.269789  normal 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  41.25 
 
 
195 aa  62.8  0.000000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3317  putative response regulator NasT  43.06 
 
 
201 aa  62.4  0.000000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.0234612  n/a   
 
 
-
 
NC_012560  Avin_23450  response regulator NasT  40.74 
 
 
192 aa  62.4  0.000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.212044  n/a   
 
 
-
 
NC_007947  Mfla_0329  response regulator receiver/ANTAR domain-containing protein  51.61 
 
 
464 aa  62.8  0.000000002  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  36.59 
 
 
194 aa  62.4  0.000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_010002  Daci_2378  response regulator receiver/ANTAR domain-containing protein  50 
 
 
421 aa  62.8  0.000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  39.76 
 
 
194 aa  62.8  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_008463  PA14_41490  hypothetical protein  41.98 
 
 
192 aa  61.2  0.000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  38.75 
 
 
224 aa  61.2  0.000000004  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_009656  PSPA7_3519  hypothetical protein  41.98 
 
 
192 aa  61.6  0.000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  37.8 
 
 
194 aa  61.2  0.000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0331  response regulator receiver:ANTAR  40 
 
 
214 aa  60.8  0.000000006  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1262  response regulator receiver/ANTAR domain-containing protein  40.74 
 
 
193 aa  60.8  0.000000006  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.425993  normal 
 
 
-
 
NC_009439  Pmen_2581  response regulator receiver/ANTAR domain-containing protein  40.74 
 
 
192 aa  60.8  0.000000006  Pseudomonas mendocina ymp  Bacteria  normal  0.298585  hitchhiker  0.00648362 
 
 
-
 
NC_012856  Rpic12D_0259  response regulator receiver and ANTAR domain protein  42.47 
 
 
212 aa  60.5  0.000000007  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1611  response regulator receiver/ANTAR domain-containing protein  41.98 
 
 
191 aa  60.5  0.000000007  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000000101988 
 
 
-
 
NC_007778  RPB_1762  response regulator receiver/ANTAR domain-containing protein  37.8 
 
 
194 aa  60.1  0.000000009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.48447  normal  0.0125916 
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  38.96 
 
 
205 aa  60.5  0.000000009  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  39.47 
 
 
212 aa  59.7  0.00000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0238  response regulator receiver and ANTAR domain protein  41.1 
 
 
212 aa  59.7  0.00000001  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2093  response regulator receiver and ANTAR domain protein  40.74 
 
 
191 aa  59.3  0.00000002  Pseudomonas putida KT2440  Bacteria  normal  0.966349  normal  0.0833699 
 
 
-
 
NC_003295  RSc0382  response regulator transcription regulator protein  41.1 
 
 
195 aa  58.9  0.00000002  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.846144 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  36 
 
 
195 aa  59.3  0.00000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0278  response regulator receiver/ANTAR domain-containing protein  39.73 
 
 
219 aa  59.3  0.00000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1604  response regulator receiver/ANTAR domain-containing protein  40.74 
 
 
191 aa  59.3  0.00000002  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0284464 
 
 
-
 
NC_009512  Pput_3647  response regulator receiver/ANTAR domain-containing protein  40.74 
 
 
191 aa  59.3  0.00000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3525  ANTAR domain protein with unknown sensor  40 
 
 
433 aa  58.2  0.00000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  32.1 
 
 
197 aa  57.8  0.00000005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  33.75 
 
 
221 aa  57.8  0.00000005  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_007794  Saro_2973  response regulator receiver/ANTAR domain-containing protein  38.27 
 
 
217 aa  56.6  0.0000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  28.4 
 
 
194 aa  56.2  0.0000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_010338  Caul_2959  response regulator receiver/ANTAR domain-containing protein  40.51 
 
 
192 aa  55.8  0.0000002  Caulobacter sp. K31  Bacteria  normal  normal  0.793007 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  34.21 
 
 
207 aa  55.8  0.0000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_008340  Mlg_1708  response regulator receiver/ANTAR domain-containing protein  43.08 
 
 
431 aa  55.5  0.0000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.667897 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  31.08 
 
 
229 aa  55.1  0.0000003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  32.43 
 
 
226 aa  54.7  0.0000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_008825  Mpe_A2314  response regulator  37.84 
 
 
426 aa  54.7  0.0000004  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  31.08 
 
 
227 aa  54.3  0.0000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  36.25 
 
 
243 aa  54.3  0.0000005  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  31.65 
 
 
194 aa  54.3  0.0000005  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  27.27 
 
 
191 aa  54.3  0.0000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  32.1 
 
 
208 aa  53.9  0.0000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_007404  Tbd_2271  response regulator receiver domain-containing protein  38.36 
 
 
188 aa  53.9  0.0000008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.187486  normal 
 
 
-
 
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