Gene Rpic_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0238 
Symbol 
ID6288315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp253722 
End bp254360 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID642623808 
Productresponse regulator receiver and ANTAR domain protein 
Protein accessionYP_001897832 
Protein GI187927345 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGA AACCGCCCAC CCCATCCGCC CCGCCCGCTG CCAACCACCC GGCCGCGCCG 
ATGCGCGTGC TGCTGGTGCG CGATCCGCTC GACGCCGAAC AGATCAATCT GGAGCTGATC
CGCGCCGGGC TGGCCGAGGC CGGCTTCGTG GACGTCGGCT TGGCGGATGC CGACCTGACG
CTGCCCGAGC GCATCGCCGA GACCCAGCCC GACATGGTGA TCGTCGCCTC CGAATCGGCC
GCGCGCGACA CCATCGAGCA CGTCTGCGTG GCCACGCAGC ATGCTCCGCG CCCCATCGTG
CTGTTCACCG ACAACGACGA CGCCACGCGC ATCAAGACGG CGTTTGCCGC CGGCATCACC
GCCTACATCG TCGACGGCAT CAAGCCCACG CGTGTGAAGG CCGTGCTGGA CGTTGCCTAT
GCCCGCTTCG AACACGAGCG TGAGTTGCGT GCCGAGCTGG ACACCGCCAA GACGCAACTC
GCCGAGCGCA AGGTCCTGGA GCGCGCCAAG GGCATGCTCA TGAAGCAGAT GAACCTGTCG
GAAGACGACG CCTTCAAGCG CCTGCGCAAG ATGGCGATGG ATCGCAACAT CAAGCTGGTG
GAAGCCGCAC AACGCGTGAT CGATGTGATG GCTGGCTGA
 
Protein sequence
MQAKPPTPSA PPAANHPAAP MRVLLVRDPL DAEQINLELI RAGLAEAGFV DVGLADADLT 
LPERIAETQP DMVIVASESA ARDTIEHVCV ATQHAPRPIV LFTDNDDATR IKTAFAAGIT
AYIVDGIKPT RVKAVLDVAY ARFEHERELR AELDTAKTQL AERKVLERAK GMLMKQMNLS
EDDAFKRLRK MAMDRNIKLV EAAQRVIDVM AG