Gene Daci_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2378 
Symbol 
ID5747941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2622194 
End bp2623459 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content72% 
IMG OID641297460 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_001563401 
Protein GI160897819 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG CTCTCAACTT TCTTGTGGCC GCGCGGCAGT GCGAAATCGG CGAGCTGGAG 
CAACTGCAGC GCACCAGCGC CCTGGTGGAT CTGCTCAGCC GCCTCATCCA TGCGCTGCAA
AAGGAGCGCG GCCTGTCCAA CGTGTTTCTG GCCAGCGCAG GCGCGCGCGG CGGCCCGGCC
AGGCTGGCCC AGATGGCCGA GTGCGACCGC ATGGCCGCTG CGGCGCGCGA CGGCTTCGAG
CGGGTGGACA TGCAGCCCGG CGGTGCGGGA CTCACCGGCC ACCCCGGCCA TGGCGCGCGG
CTGTTCAGCC GCATCGCCCA TGTGCTGCAG TGCCTGGACG CCCTGCCCGC GCTGCGCGAG
CGCGTTGCCA GCCGCGCGCT GTCGCCGGAG GCGGCCACGG CCCTCTATAT CGATCTGGTG
GCCGGCCTGC TGGCCGTGGT CTTCGAGGCG GCGGACAGCG CGCCCGAGCC CGGCATCTCG
CGCCTGCTGG TGGCCTTGTT CAACTTCATG CAGGGCAAGG AGTTCGCGGG CCAGGAGCGC
GCCACGGGCG TGGCCGCCTT TGGTGCGGGC GTCAGCGATG CGCCGCGCCA GCAGCACTGG
CTGCACCTGA TCGCCTCGCA GGAGCGCTGC TTTCAGGTCT TTGCGGAGTT CGCGCCGCCC
CATTCCCTGG CCCTGTGGCA AGAAAGCAGC GCGGCCGACG CCACGCTGGC CGTGATCGAG
CGGCTGCGCC GCGTGGGCTG CACGGCCGCA GCGGGCGCGC CTTTGTCCGT GGAGATGGCC
GAGCCCTGGT TCGACAACTG CTCGCAGCGC ATGGACGCGC TGCAGACCGT CGAGGCCCGC
CTGACCGCCG AGCTGCAGCA GCAATGCCAG CACCGCATTG CCGATGCCCG CGCCGCCCTG
CAGACGCTGC TGCAGGCGCC GCAGGCATTG GCGACCACGC CGGTCTCGGC CACGCTGGCG
CCGGGCGAGC TGCAGCCCCC GGCCGCACGG CTGGGGCCGC AGTTGGACCG TTCCGTGATG
GACCTGGTGC AGGACCAGTC GCAGCGCCTG CAGGCCATGC AGGCCGAGCT GGAGACCGTG
CGCGCCACGC TCACGGAGCG CAAGCTGCTG GAACGCGCCA AGGGCCTGCT GATGGCGCGG
CGCCAGCTCA GCGAAGGGGA GGCCCACAAG CTGCTGCGCC AGACCGCCAT GAACCAGAAC
CGCCGCCTGG CCGATGTGGC GCAGGCCGTG CTTTCCATGG CCGATCTCCT GCCGCCTGCG
CCTTGA
 
Protein sequence
MKTALNFLVA ARQCEIGELE QLQRTSALVD LLSRLIHALQ KERGLSNVFL ASAGARGGPA 
RLAQMAECDR MAAAARDGFE RVDMQPGGAG LTGHPGHGAR LFSRIAHVLQ CLDALPALRE
RVASRALSPE AATALYIDLV AGLLAVVFEA ADSAPEPGIS RLLVALFNFM QGKEFAGQER
ATGVAAFGAG VSDAPRQQHW LHLIASQERC FQVFAEFAPP HSLALWQESS AADATLAVIE
RLRRVGCTAA AGAPLSVEMA EPWFDNCSQR MDALQTVEAR LTAELQQQCQ HRIADARAAL
QTLLQAPQAL ATTPVSATLA PGELQPPAAR LGPQLDRSVM DLVQDQSQRL QAMQAELETV
RATLTERKLL ERAKGLLMAR RQLSEGEAHK LLRQTAMNQN RRLADVAQAV LSMADLLPPA
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