Gene Pnap_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1415 
Symbol 
ID4688453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1502889 
End bp1503521 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID639834417 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_981650 
Protein GI121604321 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.609776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.778661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCG TACCCTCCCT GCGTCTGGTG GTCATTGCGC CCGATCTGGT CGTTTCCGAC 
GACGGGGATG AGGCCGCCGT GGCGCTGGTG GAACGCTCGC GCCAACTGCG AATCGGCCTG
CTCGAAGGCG GCTTCAACCT GATTGCCACG TTGCCGGCCG ACACCTTTTT GCGCGAGCGG
CTGGCGCAGC TGCAGCCCGA CATGATCATC GTCGATGCCG AAAGCGATGC CCGCGATTCG
CTCGAACATG TCGTCATGGC CACGCGCGAC GAGCGCCGGC CCATCGTGCT GTTCACCAAT
GACGACGACA CCCGCCACGT CAAGGATGCC GTGGCTGCCG GCGTGTCCGC CTATATCGTC
GCCGGGCTGG AGCCGTCGCG CATCCGTCCG ATCCTGGATG TGGCCATGGC CCGCTTTCAG
CATGAGCAGG GACTGCGCCG CGAACTGGCC GACGCCCGCA CCGAGCTGAA AGACCGAAAA
GTCATCGACC GGGCCAAGGG CATGCTGATG CAGCGCCAGG GCCTGTCGGA GCAGGCGGCG
TATGAAAAAC TGCGCAAGGC GGCCATGGAC AAGGGCATGC GTCTTGGCGA TGTGGCGCAG
CGCATGCTGG ATGTTGCCGA CCTGCTGGGC TAA
 
Protein sequence
MNSVPSLRLV VIAPDLVVSD DGDEAAVALV ERSRQLRIGL LEGGFNLIAT LPADTFLRER 
LAQLQPDMII VDAESDARDS LEHVVMATRD ERRPIVLFTN DDDTRHVKDA VAAGVSAYIV
AGLEPSRIRP ILDVAMARFQ HEQGLRRELA DARTELKDRK VIDRAKGMLM QRQGLSEQAA
YEKLRKAAMD KGMRLGDVAQ RMLDVADLLG