219 homologs were found in PanDaTox collection
for query gene Mrad2831_2302 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_2302  response regulator receiver/ANTAR domain-containing protein  100 
 
 
195 aa  381  1e-105  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.874561 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  86.15 
 
 
195 aa  333  7e-91  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  86.67 
 
 
195 aa  333  1e-90  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  86.15 
 
 
195 aa  332  2e-90  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  80.31 
 
 
202 aa  313  9.999999999999999e-85  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  80.31 
 
 
204 aa  311  2.9999999999999996e-84  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  57.73 
 
 
196 aa  231  6e-60  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  57.73 
 
 
195 aa  229  2e-59  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  55.73 
 
 
194 aa  226  1e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  56.19 
 
 
207 aa  226  2e-58  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  55.73 
 
 
194 aa  225  3e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  56.19 
 
 
195 aa  225  3e-58  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  58.33 
 
 
196 aa  225  4e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_007778  RPB_1762  response regulator receiver/ANTAR domain-containing protein  56.61 
 
 
194 aa  222  2e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.48447  normal  0.0125916 
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  56.7 
 
 
196 aa  222  2e-57  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  54.4 
 
 
221 aa  214  7e-55  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_009511  Swit_1703  response regulator receiver/ANTAR domain-containing protein  53.68 
 
 
193 aa  201  7e-51  Sphingomonas wittichii RW1  Bacteria  normal  0.242071  normal 
 
 
-
 
NC_009720  Xaut_1086  response regulator receiver/ANTAR domain-containing protein  51.03 
 
 
202 aa  197  1.0000000000000001e-49  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1661  transcription antitermination regulatory protein  53.44 
 
 
194 aa  196  2.0000000000000003e-49  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00275655 
 
 
-
 
NC_007794  Saro_2973  response regulator receiver/ANTAR domain-containing protein  50.53 
 
 
217 aa  194  8.000000000000001e-49  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1262  response regulator receiver/ANTAR domain-containing protein  52.11 
 
 
193 aa  188  2.9999999999999997e-47  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.425993  normal 
 
 
-
 
NC_008687  Pden_4455  response regulator receiver/ANTAR domain-containing protein  46.88 
 
 
196 aa  173  1.9999999999999998e-42  Paracoccus denitrificans PD1222  Bacteria  normal  0.269789  normal 
 
 
-
 
NC_007802  Jann_3038  response regulator receiver/ANTAR domain-containing protein  45.55 
 
 
206 aa  169  3e-41  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  44.74 
 
 
191 aa  162  2.0000000000000002e-39  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  41.97 
 
 
224 aa  160  1e-38  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  44.92 
 
 
210 aa  160  2e-38  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_008463  PA14_41490  hypothetical protein  43.24 
 
 
192 aa  151  7e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3266  response regulator receiver/ANTAR domain-containing protein  44.77 
 
 
210 aa  150  1e-35  Polaromonas sp. JS666  Bacteria  normal  0.559806  normal 
 
 
-
 
NC_009439  Pmen_2581  response regulator receiver/ANTAR domain-containing protein  45.22 
 
 
192 aa  148  4e-35  Pseudomonas mendocina ymp  Bacteria  normal  0.298585  hitchhiker  0.00648362 
 
 
-
 
NC_012560  Avin_23450  response regulator NasT  45.22 
 
 
192 aa  148  4e-35  Azotobacter vinelandii DJ  Bacteria  normal  0.212044  n/a   
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  42.33 
 
 
191 aa  147  7e-35  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_008781  Pnap_1415  response regulator receiver/ANTAR domain-containing protein  42.55 
 
 
210 aa  147  8e-35  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.609776  normal  0.778661 
 
 
-
 
NC_009656  PSPA7_3519  hypothetical protein  41.62 
 
 
192 aa  147  9e-35  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1784  response regulator receiver  45.22 
 
 
191 aa  145  3e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2093  response regulator receiver and ANTAR domain protein  40.31 
 
 
191 aa  145  4.0000000000000006e-34  Pseudomonas putida KT2440  Bacteria  normal  0.966349  normal  0.0833699 
 
 
-
 
NC_010501  PputW619_1611  response regulator receiver/ANTAR domain-containing protein  40.84 
 
 
191 aa  145  4.0000000000000006e-34  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000000101988 
 
 
-
 
NC_009512  Pput_3647  response regulator receiver/ANTAR domain-containing protein  40.31 
 
 
191 aa  145  4.0000000000000006e-34  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2306  response regulator NasT  41.21 
 
 
191 aa  145  5e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2104  response regulator receiver:ANTAR  40.66 
 
 
191 aa  144  9e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00575971 
 
 
-
 
NC_010338  Caul_2959  response regulator receiver/ANTAR domain-containing protein  43.68 
 
 
192 aa  144  9e-34  Caulobacter sp. K31  Bacteria  normal  normal  0.793007 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  38.59 
 
 
195 aa  144  1e-33  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1604  response regulator receiver/ANTAR domain-containing protein  40.31 
 
 
191 aa  143  1e-33  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0284464 
 
 
-
 
NC_007908  Rfer_2553  response regulator receiver/ANTAR domain-containing protein  42.46 
 
 
215 aa  143  2e-33  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  41.18 
 
 
206 aa  141  6e-33  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  41.18 
 
 
206 aa  141  6e-33  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_007404  Tbd_2271  response regulator receiver domain-containing protein  42.08 
 
 
188 aa  140  9.999999999999999e-33  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.187486  normal 
 
 
-
 
NC_008786  Veis_2589  Fis family transcriptional regulator  40.61 
 
 
208 aa  140  1.9999999999999998e-32  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0488842 
 
 
-
 
NC_008752  Aave_2149  response regulator receiver/ANTAR domain-containing protein  41.86 
 
 
208 aa  139  3e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0382  response regulator transcription regulator protein  40.56 
 
 
195 aa  136  2e-31  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.846144 
 
 
-
 
NC_007973  Rmet_0278  response regulator receiver/ANTAR domain-containing protein  41.82 
 
 
219 aa  135  3.0000000000000003e-31  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3445  response regulator receiver/ANTAR domain-containing protein  45.39 
 
 
191 aa  135  5e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0331  response regulator receiver:ANTAR  40.7 
 
 
214 aa  134  6.0000000000000005e-31  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  46.21 
 
 
191 aa  133  9.999999999999999e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_012856  Rpic12D_0259  response regulator receiver and ANTAR domain protein  37.64 
 
 
212 aa  131  5e-30  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  44.83 
 
 
191 aa  131  6.999999999999999e-30  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  37.43 
 
 
212 aa  131  6.999999999999999e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0238  response regulator receiver and ANTAR domain protein  37.64 
 
 
212 aa  131  6.999999999999999e-30  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1340  response regulator receiver/ANTAR domain-containing protein  47.48 
 
 
198 aa  130  1.0000000000000001e-29  Burkholderia sp. 383  Bacteria  normal  normal  0.579049 
 
 
-
 
NC_008061  Bcen_3858  response regulator receiver/ANTAR domain-containing protein  47.48 
 
 
219 aa  130  1.0000000000000001e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.853052  n/a   
 
 
-
 
NC_008543  Bcen2424_4510  response regulator receiver/ANTAR domain-containing protein  47.48 
 
 
219 aa  130  1.0000000000000001e-29  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.000166869  normal 
 
 
-
 
NC_010086  Bmul_4144  response regulator receiver/ANTAR domain-containing protein  47.48 
 
 
201 aa  130  1.0000000000000001e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.071014 
 
 
-
 
NC_006349  BMAA1090  response regulator NasT  48.2 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0864919  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0246  response regulator NasT  48.2 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0087  response regulator/ANTAR domain-containing protein  48.2 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia mallei SAVP1  Bacteria  normal  0.792302  n/a   
 
 
-
 
NC_008835  BMA10229_0333  response regulator NasT  48.2 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  0.169956  n/a   
 
 
-
 
NC_009075  BURPS668_A1759  response regulator/ANTAR domain-containing protein  48.2 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1670  response regulator/ANTAR domain-containing protein  48.2 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1255  response regulator/ANTAR domain-containing protein  48.2 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0422038  n/a   
 
 
-
 
NC_010515  Bcenmc03_5794  response regulator receiver/ANTAR domain-containing protein  47.48 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3940  response regulator receiver/ANTAR domain-containing protein  47.83 
 
 
198 aa  129  3e-29  Burkholderia ambifaria AMMD  Bacteria  normal  0.590133  normal 
 
 
-
 
NC_010552  BamMC406_4403  response regulator receiver/ANTAR domain-containing protein  47.83 
 
 
198 aa  129  3e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.155669 
 
 
-
 
NC_007650  BTH_II1167  response regulator NasT  46.76 
 
 
198 aa  126  2.0000000000000002e-28  Burkholderia thailandensis E264  Bacteria  normal  0.136185  n/a   
 
 
-
 
NC_011666  Msil_3768  response regulator receiver and ANTAR domain protein  36.96 
 
 
195 aa  120  9.999999999999999e-27  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_003910  CPS_3317  putative response regulator NasT  30.89 
 
 
201 aa  117  7e-26  Colwellia psychrerythraea 34H  Bacteria  normal  0.0234612  n/a   
 
 
-
 
NC_007963  Csal_1132  response regulator receiver/ANTAR domain-containing protein  35.26 
 
 
194 aa  117  9.999999999999999e-26  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.169793  n/a   
 
 
-
 
NC_007520  Tcr_0769  response regulator receiver/ANTAR domain-containing protein  33.33 
 
 
214 aa  113  1.0000000000000001e-24  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0679202  n/a   
 
 
-
 
NC_010581  Bind_1968  response regulator receiver/ANTAR domain-containing protein  37.75 
 
 
193 aa  107  2e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3275  response regulator receiver/ANTAR domain-containing protein  29.94 
 
 
430 aa  97.4  1e-19  Polaromonas sp. JS666  Bacteria  normal  0.197236  normal 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  33.15 
 
 
196 aa  96.3  2e-19  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  33.15 
 
 
196 aa  95.5  4e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2590  response regulator receiver/ANTAR domain-containing protein  35.48 
 
 
193 aa  94.7  7e-19  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.0012524 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  36 
 
 
194 aa  94.7  8e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_010524  Lcho_2675  response regulator receiver/ANTAR domain-containing protein  33.33 
 
 
383 aa  94.4  1e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  36.59 
 
 
247 aa  92.8  3e-18  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  30.54 
 
 
194 aa  92.8  3e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  31.72 
 
 
197 aa  91.7  7e-18  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  31.03 
 
 
194 aa  90.9  1e-17  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  31.03 
 
 
191 aa  89.4  4e-17  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  31.55 
 
 
206 aa  88.6  6e-17  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  30.86 
 
 
195 aa  87.4  1e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  30.81 
 
 
213 aa  86.7  2e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_007498  Pcar_2091  response regulator  32.17 
 
 
187 aa  85.9  3e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  29.65 
 
 
229 aa  84.3  0.000000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  31.33 
 
 
220 aa  83.2  0.000000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  29.65 
 
 
210 aa  82.8  0.000000000000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  29.65 
 
 
210 aa  82.8  0.000000000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  29.65 
 
 
210 aa  82.8  0.000000000000003  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_012880  Dd703_2508  ANTAR domain protein with unknown sensor  43.43 
 
 
427 aa  81.6  0.000000000000006  Dickeya dadantii Ech703  Bacteria  normal  0.102211  n/a   
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  29.25 
 
 
199 aa  81.6  0.000000000000006  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  29.08 
 
 
199 aa  80.9  0.00000000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
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