Gene Tcr_0769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0769 
Symbol 
ID3761896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp839888 
End bp840532 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content42% 
IMG OID637785487 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_391039 
Protein GI78485114 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0679202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTTTA ATGCGTTATT AGTCAGCGAT GATGTTAACC ATTCAGCAGA ACTGAAGTCT 
GGGTTAATTT TTGCAGGTGC TCATAATGTG ACTGTGGTCG GAATGGATGA GAGCTGGACA 
GAGCTTTTAT CTGCAGACAC GTATGATTTG CTGGTCTTGG AATGTCATCA GGTGTCGGAA 
GGTATGTTAA ATACTTTGGC GGACTTGAAT GAAAATCCAG CCATTCCTGT TATTTGTTTT 
ACCAGTGAGA GAGATTCAAA AGTGATTAAG CAATCCGTTA AATCGGGTGT GATGGCTTTT 
GTGGTGGGGG ATAAAAATCA GAATCGTATG AAACCAATCG TTGATGTCGC TTTAGCGCGC 
TTTAGTGAAC AACGTGCCTT AAAAAAAGAA TTATCGCAAT TAAAAGATAA GCTGGCCAAT 
AGAGCCATGA TCGAAAAAGC AAAAGGTCTT TTAATGCAAA CAAGAGGGAT ATCAGAGGAT 
GAGGCATACC ATGAAATACG GAGACATGCG ATGAACCAGG GGAAAAGGTT GTCCGAAGTG 
GCGGAAACAT TTTGTTCAAC CTTGAACGGC GAAACTCAGC GGGAGGGAAG TTTATTTACA 
GATAAACCGA TTGCAGAGGT TCAGCAGAAC CCTATTTTTG ACTGA
 
Protein sequence
MGFNALLVSD DVNHSAELKS GLIFAGAHNV TVVGMDESWT ELLSADTYDL LVLECHQVSE 
GMLNTLADLN ENPAIPVICF TSERDSKVIK QSVKSGVMAF VVGDKNQNRM KPIVDVALAR 
FSEQRALKKE LSQLKDKLAN RAMIEKAKGL LMQTRGISED EAYHEIRRHA MNQGKRLSEV 
AETFCSTLNG ETQREGSLFT DKPIAEVQQN PIFD