208 homologs were found in PanDaTox collection
for query gene Saro_2973 on replicon NC_007794
Organism: Novosphingobium aromaticivorans DSM 12444



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007794  Saro_2973  response regulator receiver/ANTAR domain-containing protein  100 
 
 
217 aa  430  1e-120  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1703  response regulator receiver/ANTAR domain-containing protein  59.69 
 
 
193 aa  229  3e-59  Sphingomonas wittichii RW1  Bacteria  normal  0.242071  normal 
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  54.5 
 
 
194 aa  211  9e-54  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_007778  RPB_1762  response regulator receiver/ANTAR domain-containing protein  54.21 
 
 
194 aa  208  5e-53  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.48447  normal  0.0125916 
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  52.91 
 
 
194 aa  206  2e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  51.55 
 
 
195 aa  204  6e-52  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  51.32 
 
 
195 aa  203  2e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  53.19 
 
 
196 aa  202  2e-51  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  47.89 
 
 
221 aa  201  6e-51  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  50.79 
 
 
207 aa  201  9e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_009720  Xaut_1086  response regulator receiver/ANTAR domain-containing protein  48.68 
 
 
202 aa  201  9e-51  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1262  response regulator receiver/ANTAR domain-containing protein  54.74 
 
 
193 aa  200  9.999999999999999e-51  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.425993  normal 
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  48.78 
 
 
202 aa  198  6e-50  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  50.53 
 
 
204 aa  197  1.0000000000000001e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  49.21 
 
 
196 aa  196  2.0000000000000003e-49  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  48.97 
 
 
196 aa  196  2.0000000000000003e-49  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  51.58 
 
 
195 aa  194  6e-49  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_010505  Mrad2831_2302  response regulator receiver/ANTAR domain-containing protein  50.53 
 
 
195 aa  194  1e-48  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.874561 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  51.05 
 
 
195 aa  192  3e-48  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  50.53 
 
 
195 aa  191  1e-47  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1661  transcription antitermination regulatory protein  47.62 
 
 
194 aa  184  1.0000000000000001e-45  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00275655 
 
 
-
 
NC_008687  Pden_4455  response regulator receiver/ANTAR domain-containing protein  50.53 
 
 
196 aa  181  7e-45  Paracoccus denitrificans PD1222  Bacteria  normal  0.269789  normal 
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  38.74 
 
 
212 aa  151  5.9999999999999996e-36  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3038  response regulator receiver/ANTAR domain-containing protein  42.33 
 
 
206 aa  148  8e-35  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  41.8 
 
 
191 aa  142  3e-33  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  36.65 
 
 
224 aa  134  9e-31  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_007404  Tbd_2271  response regulator receiver domain-containing protein  39.89 
 
 
188 aa  131  6e-30  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.187486  normal 
 
 
-
 
NC_012560  Avin_23450  response regulator NasT  34.69 
 
 
192 aa  131  6e-30  Azotobacter vinelandii DJ  Bacteria  normal  0.212044  n/a   
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  40.88 
 
 
210 aa  132  6e-30  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_008463  PA14_41490  hypothetical protein  35.03 
 
 
192 aa  131  7.999999999999999e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1090  response regulator NasT  39.25 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0864919  n/a   
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  37.37 
 
 
191 aa  130  2.0000000000000002e-29  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_007435  BURPS1710b_A0246  response regulator NasT  39.25 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0087  response regulator/ANTAR domain-containing protein  39.25 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia mallei SAVP1  Bacteria  normal  0.792302  n/a   
 
 
-
 
NC_008835  BMA10229_0333  response regulator NasT  39.25 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  0.169956  n/a   
 
 
-
 
NC_009075  BURPS668_A1759  response regulator/ANTAR domain-containing protein  39.25 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1670  response regulator/ANTAR domain-containing protein  39.25 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1255  response regulator/ANTAR domain-containing protein  39.25 
 
 
198 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0422038  n/a   
 
 
-
 
NC_008061  Bcen_3858  response regulator receiver/ANTAR domain-containing protein  41.08 
 
 
219 aa  129  4.0000000000000003e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.853052  n/a   
 
 
-
 
NC_010515  Bcenmc03_5794  response regulator receiver/ANTAR domain-containing protein  41.08 
 
 
198 aa  129  4.0000000000000003e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4510  response regulator receiver/ANTAR domain-containing protein  41.08 
 
 
219 aa  129  4.0000000000000003e-29  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.000166869  normal 
 
 
-
 
NC_009656  PSPA7_3519  hypothetical protein  34.01 
 
 
192 aa  129  4.0000000000000003e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1784  response regulator receiver  35.38 
 
 
191 aa  128  6e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3445  response regulator receiver/ANTAR domain-containing protein  36.51 
 
 
191 aa  128  6e-29  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2149  response regulator receiver/ANTAR domain-containing protein  39.34 
 
 
208 aa  128  7.000000000000001e-29  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1167  response regulator NasT  38.71 
 
 
198 aa  127  1.0000000000000001e-28  Burkholderia thailandensis E264  Bacteria  normal  0.136185  n/a   
 
 
-
 
NC_004578  PSPTO_2306  response regulator NasT  34.87 
 
 
191 aa  126  2.0000000000000002e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2104  response regulator receiver:ANTAR  35.2 
 
 
191 aa  126  2.0000000000000002e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00575971 
 
 
-
 
NC_007511  Bcep18194_B1340  response regulator receiver/ANTAR domain-containing protein  40.54 
 
 
198 aa  127  2.0000000000000002e-28  Burkholderia sp. 383  Bacteria  normal  normal  0.579049 
 
 
-
 
NC_008786  Veis_2589  Fis family transcriptional regulator  42.21 
 
 
208 aa  126  2.0000000000000002e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0488842 
 
 
-
 
NC_007948  Bpro_3266  response regulator receiver/ANTAR domain-containing protein  36.84 
 
 
210 aa  125  3e-28  Polaromonas sp. JS666  Bacteria  normal  0.559806  normal 
 
 
-
 
NC_008391  Bamb_3940  response regulator receiver/ANTAR domain-containing protein  40.54 
 
 
198 aa  126  3e-28  Burkholderia ambifaria AMMD  Bacteria  normal  0.590133  normal 
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  41.72 
 
 
206 aa  126  3e-28  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  41.72 
 
 
206 aa  126  3e-28  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_010552  BamMC406_4403  response regulator receiver/ANTAR domain-containing protein  41.34 
 
 
198 aa  126  3e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.155669 
 
 
-
 
NC_002947  PP_2093  response regulator receiver and ANTAR domain protein  35.2 
 
 
191 aa  125  4.0000000000000003e-28  Pseudomonas putida KT2440  Bacteria  normal  0.966349  normal  0.0833699 
 
 
-
 
NC_010086  Bmul_4144  response regulator receiver/ANTAR domain-containing protein  43.43 
 
 
201 aa  125  4.0000000000000003e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.071014 
 
 
-
 
NC_009512  Pput_3647  response regulator receiver/ANTAR domain-containing protein  35.2 
 
 
191 aa  125  4.0000000000000003e-28  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  37.43 
 
 
191 aa  125  5e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_009439  Pmen_2581  response regulator receiver/ANTAR domain-containing protein  32.99 
 
 
192 aa  125  5e-28  Pseudomonas mendocina ymp  Bacteria  normal  0.298585  hitchhiker  0.00648362 
 
 
-
 
NC_010322  PputGB1_1604  response regulator receiver/ANTAR domain-containing protein  35.38 
 
 
191 aa  125  6e-28  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0284464 
 
 
-
 
NC_008781  Pnap_1415  response regulator receiver/ANTAR domain-containing protein  42.38 
 
 
210 aa  124  8.000000000000001e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.609776  normal  0.778661 
 
 
-
 
NC_010501  PputW619_1611  response regulator receiver/ANTAR domain-containing protein  34.69 
 
 
191 aa  123  2e-27  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000000101988 
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  35.48 
 
 
191 aa  122  3e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
NC_010338  Caul_2959  response regulator receiver/ANTAR domain-containing protein  37.44 
 
 
192 aa  119  3e-26  Caulobacter sp. K31  Bacteria  normal  normal  0.793007 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  29.32 
 
 
195 aa  117  9.999999999999999e-26  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1968  response regulator receiver/ANTAR domain-containing protein  36.41 
 
 
193 aa  114  8.999999999999998e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2553  response regulator receiver/ANTAR domain-containing protein  39.13 
 
 
215 aa  114  1.0000000000000001e-24  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0382  response regulator transcription regulator protein  36.69 
 
 
195 aa  112  6e-24  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.846144 
 
 
-
 
NC_012856  Rpic12D_0259  response regulator receiver and ANTAR domain protein  33.69 
 
 
212 aa  108  6e-23  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0238  response regulator receiver and ANTAR domain protein  33.69 
 
 
212 aa  108  7.000000000000001e-23  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0278  response regulator receiver/ANTAR domain-containing protein  35.5 
 
 
219 aa  107  2e-22  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3768  response regulator receiver and ANTAR domain protein  30.43 
 
 
195 aa  105  5e-22  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007347  Reut_A0331  response regulator receiver:ANTAR  32.63 
 
 
214 aa  103  2e-21  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1132  response regulator receiver/ANTAR domain-containing protein  33.33 
 
 
194 aa  101  9e-21  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.169793  n/a   
 
 
-
 
NC_003910  CPS_3317  putative response regulator NasT  30.97 
 
 
201 aa  98.2  8e-20  Colwellia psychrerythraea 34H  Bacteria  normal  0.0234612  n/a   
 
 
-
 
NC_007520  Tcr_0769  response regulator receiver/ANTAR domain-containing protein  30.39 
 
 
214 aa  95.9  4e-19  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0679202  n/a   
 
 
-
 
NC_007948  Bpro_3275  response regulator receiver/ANTAR domain-containing protein  32 
 
 
430 aa  94  1e-18  Polaromonas sp. JS666  Bacteria  normal  0.197236  normal 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  28.42 
 
 
191 aa  88.2  9e-17  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  31.51 
 
 
197 aa  87  2e-16  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  30.93 
 
 
196 aa  87.4  2e-16  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  29.47 
 
 
195 aa  86.7  3e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  29.9 
 
 
196 aa  84.3  0.000000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2675  response regulator receiver/ANTAR domain-containing protein  33.1 
 
 
383 aa  84.7  0.000000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  30.5 
 
 
220 aa  84.3  0.000000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  27.53 
 
 
199 aa  83.6  0.000000000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  28.86 
 
 
199 aa  82.8  0.000000000000003  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  28.73 
 
 
201 aa  82.8  0.000000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  27.96 
 
 
194 aa  82.8  0.000000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  28.57 
 
 
201 aa  82  0.000000000000005  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  29.8 
 
 
215 aa  82  0.000000000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  28.36 
 
 
229 aa  82  0.000000000000006  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  27.96 
 
 
194 aa  82  0.000000000000006  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  29.38 
 
 
194 aa  81.3  0.00000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  29.79 
 
 
226 aa  81.3  0.00000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  31.91 
 
 
204 aa  79.7  0.00000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  27.64 
 
 
227 aa  80.1  0.00000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  29.34 
 
 
205 aa  79.3  0.00000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  29.29 
 
 
206 aa  77  0.0000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  27.66 
 
 
202 aa  76.3  0.0000000000003  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
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