192 homologs were found in PanDaTox collection
for query gene Sala_1262 on replicon NC_008048
Organism: Sphingopyxis alaskensis RB2256



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008048  Sala_1262  response regulator receiver/ANTAR domain-containing protein  100 
 
 
193 aa  375  1e-103  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.425993  normal 
 
 
-
 
NC_009511  Swit_1703  response regulator receiver/ANTAR domain-containing protein  62.18 
 
 
193 aa  242  3e-63  Sphingomonas wittichii RW1  Bacteria  normal  0.242071  normal 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  55.85 
 
 
196 aa  206  2e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  52.38 
 
 
195 aa  206  2e-52  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  52.38 
 
 
194 aa  205  4e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  51.85 
 
 
196 aa  203  1e-51  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2973  response regulator receiver/ANTAR domain-containing protein  54.74 
 
 
217 aa  200  9.999999999999999e-51  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  52.38 
 
 
196 aa  199  9.999999999999999e-51  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  50.26 
 
 
195 aa  199  3e-50  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  50.79 
 
 
194 aa  197  5e-50  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  53.44 
 
 
221 aa  197  7.999999999999999e-50  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  49.21 
 
 
207 aa  196  2.0000000000000003e-49  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  53.93 
 
 
195 aa  196  2.0000000000000003e-49  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  52.11 
 
 
195 aa  195  4.0000000000000005e-49  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  52.11 
 
 
195 aa  194  7e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_007778  RPB_1762  response regulator receiver/ANTAR domain-containing protein  50.26 
 
 
194 aa  194  9e-49  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.48447  normal  0.0125916 
 
 
-
 
NC_009720  Xaut_1086  response regulator receiver/ANTAR domain-containing protein  49.74 
 
 
202 aa  190  1e-47  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2302  response regulator receiver/ANTAR domain-containing protein  52.11 
 
 
195 aa  188  2.9999999999999997e-47  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.874561 
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  52.08 
 
 
204 aa  185  3e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  51.58 
 
 
202 aa  185  4e-46  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_008687  Pden_4455  response regulator receiver/ANTAR domain-containing protein  52.63 
 
 
196 aa  178  2.9999999999999997e-44  Paracoccus denitrificans PD1222  Bacteria  normal  0.269789  normal 
 
 
-
 
NC_009952  Dshi_1661  transcription antitermination regulatory protein  50.26 
 
 
194 aa  174  7e-43  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00275655 
 
 
-
 
NC_007802  Jann_3038  response regulator receiver/ANTAR domain-containing protein  47.62 
 
 
206 aa  164  5.9999999999999996e-40  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  37.37 
 
 
224 aa  137  7e-32  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  39.34 
 
 
191 aa  135  3.0000000000000003e-31  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  39.15 
 
 
191 aa  134  7.000000000000001e-31  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_007005  Psyr_2104  response regulator receiver:ANTAR  37.82 
 
 
191 aa  132  3e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00575971 
 
 
-
 
NC_004578  PSPTO_2306  response regulator NasT  37.31 
 
 
191 aa  131  5e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1784  response regulator receiver  37.82 
 
 
191 aa  131  5e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_23450  response regulator NasT  36.27 
 
 
192 aa  130  1.0000000000000001e-29  Azotobacter vinelandii DJ  Bacteria  normal  0.212044  n/a   
 
 
-
 
NC_009439  Pmen_2581  response regulator receiver/ANTAR domain-containing protein  36.79 
 
 
192 aa  130  2.0000000000000002e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.298585  hitchhiker  0.00648362 
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  34.78 
 
 
212 aa  129  3e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1611  response regulator receiver/ANTAR domain-containing protein  36.92 
 
 
191 aa  128  5.0000000000000004e-29  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000000101988 
 
 
-
 
NC_010322  PputGB1_1604  response regulator receiver/ANTAR domain-containing protein  36.41 
 
 
191 aa  126  2.0000000000000002e-28  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0284464 
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  43.51 
 
 
210 aa  126  2.0000000000000002e-28  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_002947  PP_2093  response regulator receiver and ANTAR domain protein  36.41 
 
 
191 aa  125  3e-28  Pseudomonas putida KT2440  Bacteria  normal  0.966349  normal  0.0833699 
 
 
-
 
NC_008463  PA14_41490  hypothetical protein  36.27 
 
 
192 aa  125  3e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3647  response regulator receiver/ANTAR domain-containing protein  36.41 
 
 
191 aa  125  3e-28  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3768  response regulator receiver and ANTAR domain protein  38.17 
 
 
195 aa  124  7e-28  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009656  PSPA7_3519  hypothetical protein  35.23 
 
 
192 aa  124  8.000000000000001e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2271  response regulator receiver domain-containing protein  38.25 
 
 
188 aa  124  1e-27  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.187486  normal 
 
 
-
 
NC_003295  RSc0382  response regulator transcription regulator protein  38.76 
 
 
195 aa  122  5e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.846144 
 
 
-
 
NC_007948  Bpro_3266  response regulator receiver/ANTAR domain-containing protein  40.46 
 
 
210 aa  119  1.9999999999999998e-26  Polaromonas sp. JS666  Bacteria  normal  0.559806  normal 
 
 
-
 
NC_007973  Rmet_0278  response regulator receiver/ANTAR domain-containing protein  39.88 
 
 
219 aa  119  1.9999999999999998e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  38.82 
 
 
191 aa  120  1.9999999999999998e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_010623  Bphy_3445  response regulator receiver/ANTAR domain-containing protein  38.15 
 
 
191 aa  119  1.9999999999999998e-26  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  38.82 
 
 
191 aa  119  3e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
NC_006349  BMAA1090  response regulator NasT  42.86 
 
 
198 aa  119  3.9999999999999996e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0864919  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0246  response regulator NasT  42.86 
 
 
198 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  30.98 
 
 
195 aa  119  3.9999999999999996e-26  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0259  response regulator receiver and ANTAR domain protein  38.2 
 
 
212 aa  118  3.9999999999999996e-26  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_0087  response regulator/ANTAR domain-containing protein  42.86 
 
 
198 aa  119  3.9999999999999996e-26  Burkholderia mallei SAVP1  Bacteria  normal  0.792302  n/a   
 
 
-
 
NC_008835  BMA10229_0333  response regulator NasT  42.86 
 
 
198 aa  119  3.9999999999999996e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  0.169956  n/a   
 
 
-
 
NC_009075  BURPS668_A1759  response regulator/ANTAR domain-containing protein  42.86 
 
 
198 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1670  response regulator/ANTAR domain-containing protein  42.86 
 
 
198 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1255  response regulator/ANTAR domain-containing protein  42.86 
 
 
198 aa  119  3.9999999999999996e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0422038  n/a   
 
 
-
 
NC_010682  Rpic_0238  response regulator receiver and ANTAR domain protein  38.2 
 
 
212 aa  118  4.9999999999999996e-26  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1415  response regulator receiver/ANTAR domain-containing protein  39.31 
 
 
210 aa  117  7.999999999999999e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.609776  normal  0.778661 
 
 
-
 
NC_010515  Bcenmc03_5794  response regulator receiver/ANTAR domain-containing protein  43.36 
 
 
198 aa  117  9.999999999999999e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3858  response regulator receiver/ANTAR domain-containing protein  43.36 
 
 
219 aa  116  1.9999999999999998e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.853052  n/a   
 
 
-
 
NC_008391  Bamb_3940  response regulator receiver/ANTAR domain-containing protein  41.5 
 
 
198 aa  116  1.9999999999999998e-25  Burkholderia ambifaria AMMD  Bacteria  normal  0.590133  normal 
 
 
-
 
NC_008543  Bcen2424_4510  response regulator receiver/ANTAR domain-containing protein  43.36 
 
 
219 aa  116  1.9999999999999998e-25  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.000166869  normal 
 
 
-
 
NC_008752  Aave_2149  response regulator receiver/ANTAR domain-containing protein  39.88 
 
 
208 aa  116  1.9999999999999998e-25  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4403  response regulator receiver/ANTAR domain-containing protein  43.88 
 
 
198 aa  116  1.9999999999999998e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.155669 
 
 
-
 
NC_007511  Bcep18194_B1340  response regulator receiver/ANTAR domain-containing protein  42.66 
 
 
198 aa  115  6e-25  Burkholderia sp. 383  Bacteria  normal  normal  0.579049 
 
 
-
 
NC_010086  Bmul_4144  response regulator receiver/ANTAR domain-containing protein  42.04 
 
 
201 aa  114  6.9999999999999995e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.071014 
 
 
-
 
NC_008786  Veis_2589  Fis family transcriptional regulator  39.44 
 
 
208 aa  114  6.9999999999999995e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0488842 
 
 
-
 
NC_007347  Reut_A0331  response regulator receiver:ANTAR  38.69 
 
 
214 aa  114  1.0000000000000001e-24  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1167  response regulator NasT  40.82 
 
 
198 aa  113  1.0000000000000001e-24  Burkholderia thailandensis E264  Bacteria  normal  0.136185  n/a   
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  37.79 
 
 
206 aa  112  2.0000000000000002e-24  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  37.79 
 
 
206 aa  112  2.0000000000000002e-24  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_010338  Caul_2959  response regulator receiver/ANTAR domain-containing protein  37.5 
 
 
192 aa  111  6e-24  Caulobacter sp. K31  Bacteria  normal  normal  0.793007 
 
 
-
 
NC_007908  Rfer_2553  response regulator receiver/ANTAR domain-containing protein  36.67 
 
 
215 aa  104  6e-22  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1968  response regulator receiver/ANTAR domain-containing protein  34.04 
 
 
193 aa  104  6e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1132  response regulator receiver/ANTAR domain-containing protein  31.18 
 
 
194 aa  97.4  1e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.169793  n/a   
 
 
-
 
NC_007948  Bpro_3275  response regulator receiver/ANTAR domain-containing protein  32.35 
 
 
430 aa  95.9  3e-19  Polaromonas sp. JS666  Bacteria  normal  0.197236  normal 
 
 
-
 
NC_003910  CPS_3317  putative response regulator NasT  30.11 
 
 
201 aa  91.7  7e-18  Colwellia psychrerythraea 34H  Bacteria  normal  0.0234612  n/a   
 
 
-
 
NC_007520  Tcr_0769  response regulator receiver/ANTAR domain-containing protein  28.04 
 
 
214 aa  91.7  7e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0679202  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  31.94 
 
 
197 aa  84  0.000000000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_010524  Lcho_2675  response regulator receiver/ANTAR domain-containing protein  28.57 
 
 
383 aa  80.9  0.00000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  31.15 
 
 
206 aa  76.3  0.0000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_008340  Mlg_2590  response regulator receiver/ANTAR domain-containing protein  29.41 
 
 
193 aa  75.5  0.0000000000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.0012524 
 
 
-
 
NC_002939  GSU2822  response regulator  25.15 
 
 
191 aa  75.1  0.0000000000006  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  29.66 
 
 
196 aa  72.4  0.000000000004  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2091  response regulator  27.06 
 
 
187 aa  72  0.000000000005  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2314  response regulator  30.49 
 
 
426 aa  72  0.000000000005  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  32.19 
 
 
194 aa  72  0.000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  30.06 
 
 
205 aa  72  0.000000000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  24.56 
 
 
202 aa  71.6  0.000000000006  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  29.66 
 
 
196 aa  71.6  0.000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  28.25 
 
 
194 aa  71.6  0.000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  26.14 
 
 
194 aa  70.9  0.00000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  28.07 
 
 
220 aa  70.9  0.00000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  27.08 
 
 
191 aa  70.5  0.00000000002  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  26.71 
 
 
199 aa  69.7  0.00000000003  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  31.85 
 
 
198 aa  69.3  0.00000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  27.81 
 
 
194 aa  69.7  0.00000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  28.33 
 
 
226 aa  69.7  0.00000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  22.67 
 
 
188 aa  68.6  0.00000000005  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  28.26 
 
 
215 aa  68.6  0.00000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
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