More than 300 homologs were found in PanDaTox collection
for query gene Bind_1968 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_1968  response regulator receiver/ANTAR domain-containing protein  100 
 
 
193 aa  380  1e-105  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3768  response regulator receiver and ANTAR domain protein  43.78 
 
 
195 aa  155  3e-37  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  36.55 
 
 
212 aa  130  1.0000000000000001e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1661  transcription antitermination regulatory protein  39.89 
 
 
194 aa  122  3e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00275655 
 
 
-
 
NC_009511  Swit_1703  response regulator receiver/ANTAR domain-containing protein  39.79 
 
 
193 aa  115  3e-25  Sphingomonas wittichii RW1  Bacteria  normal  0.242071  normal 
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  36.84 
 
 
221 aa  115  5e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_007794  Saro_2973  response regulator receiver/ANTAR domain-containing protein  36.41 
 
 
217 aa  114  6.9999999999999995e-25  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  36.9 
 
 
196 aa  114  1.0000000000000001e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4455  response regulator receiver/ANTAR domain-containing protein  43.17 
 
 
196 aa  112  4.0000000000000004e-24  Paracoccus denitrificans PD1222  Bacteria  normal  0.269789  normal 
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  34.78 
 
 
224 aa  111  5e-24  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  36.67 
 
 
195 aa  111  7.000000000000001e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  35.56 
 
 
204 aa  110  1.0000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  35.56 
 
 
202 aa  110  1.0000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  36.11 
 
 
195 aa  109  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  33.51 
 
 
196 aa  109  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  34.95 
 
 
196 aa  108  4.0000000000000004e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  36.36 
 
 
207 aa  108  6e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_010505  Mrad2831_2302  response regulator receiver/ANTAR domain-containing protein  37.75 
 
 
195 aa  107  1e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.874561 
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  33.68 
 
 
194 aa  107  1e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_011988  Avi_5900  two component response regulator  33.33 
 
 
195 aa  107  1e-22  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  35.29 
 
 
195 aa  106  2e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_007802  Jann_3038  response regulator receiver/ANTAR domain-containing protein  37.7 
 
 
206 aa  106  3e-22  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1762  response regulator receiver/ANTAR domain-containing protein  32.28 
 
 
194 aa  104  6e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.48447  normal  0.0125916 
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  33.16 
 
 
194 aa  105  6e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1262  response regulator receiver/ANTAR domain-containing protein  34.04 
 
 
193 aa  104  6e-22  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.425993  normal 
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  40 
 
 
195 aa  104  8e-22  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_009720  Xaut_1086  response regulator receiver/ANTAR domain-containing protein  36.17 
 
 
202 aa  103  1e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  32.43 
 
 
195 aa  100  1e-20  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2271  response regulator receiver domain-containing protein  36.65 
 
 
188 aa  99  4e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.187486  normal 
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  41.91 
 
 
210 aa  97.8  7e-20  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  36.21 
 
 
206 aa  97.8  9e-20  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  36.21 
 
 
206 aa  97.8  9e-20  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_008752  Aave_2149  response regulator receiver/ANTAR domain-containing protein  36.67 
 
 
208 aa  97.4  1e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2589  Fis family transcriptional regulator  37.36 
 
 
208 aa  96.7  2e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0488842 
 
 
-
 
NC_007948  Bpro_3266  response regulator receiver/ANTAR domain-containing protein  38.13 
 
 
210 aa  96.3  3e-19  Polaromonas sp. JS666  Bacteria  normal  0.559806  normal 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  34.25 
 
 
191 aa  95.5  4e-19  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_008781  Pnap_1415  response regulator receiver/ANTAR domain-containing protein  39.57 
 
 
210 aa  95.9  4e-19  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.609776  normal  0.778661 
 
 
-
 
NC_002947  PP_2093  response regulator receiver and ANTAR domain protein  35.75 
 
 
191 aa  94.7  8e-19  Pseudomonas putida KT2440  Bacteria  normal  0.966349  normal  0.0833699 
 
 
-
 
NC_009512  Pput_3647  response regulator receiver/ANTAR domain-containing protein  35.75 
 
 
191 aa  94.7  8e-19  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  38.41 
 
 
198 aa  93.6  1e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_012560  Avin_23450  response regulator NasT  37.86 
 
 
192 aa  94  1e-18  Azotobacter vinelandii DJ  Bacteria  normal  0.212044  n/a   
 
 
-
 
NC_010338  Caul_2959  response regulator receiver/ANTAR domain-containing protein  35.48 
 
 
192 aa  92.8  2e-18  Caulobacter sp. K31  Bacteria  normal  normal  0.793007 
 
 
-
 
NC_010322  PputGB1_1604  response regulator receiver/ANTAR domain-containing protein  37.41 
 
 
191 aa  93.6  2e-18  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0284464 
 
 
-
 
NC_010501  PputW619_1611  response regulator receiver/ANTAR domain-containing protein  35.86 
 
 
191 aa  92  4e-18  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000000101988 
 
 
-
 
NC_007908  Rfer_2553  response regulator receiver/ANTAR domain-containing protein  36.99 
 
 
215 aa  92  5e-18  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1784  response regulator receiver  35.21 
 
 
191 aa  91.3  7e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2306  response regulator NasT  35.21 
 
 
191 aa  91.3  8e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3445  response regulator receiver/ANTAR domain-containing protein  34.93 
 
 
191 aa  90.9  1e-17  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1132  response regulator receiver/ANTAR domain-containing protein  31.38 
 
 
194 aa  90.5  1e-17  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.169793  n/a   
 
 
-
 
NC_003295  RSc0382  response regulator transcription regulator protein  38.97 
 
 
195 aa  90.1  2e-17  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.846144 
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  33.16 
 
 
191 aa  89.7  2e-17  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_009656  PSPA7_3519  hypothetical protein  34.53 
 
 
192 aa  89.7  2e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3940  response regulator receiver/ANTAR domain-containing protein  37.01 
 
 
198 aa  89.7  2e-17  Burkholderia ambifaria AMMD  Bacteria  normal  0.590133  normal 
 
 
-
 
NC_008463  PA14_41490  hypothetical protein  34.53 
 
 
192 aa  90.1  2e-17  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2581  response regulator receiver/ANTAR domain-containing protein  35.25 
 
 
192 aa  89.7  2e-17  Pseudomonas mendocina ymp  Bacteria  normal  0.298585  hitchhiker  0.00648362 
 
 
-
 
NC_010552  BamMC406_4403  response regulator receiver/ANTAR domain-containing protein  37.01 
 
 
198 aa  89.4  3e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.155669 
 
 
-
 
NC_007005  Psyr_2104  response regulator receiver:ANTAR  34.51 
 
 
191 aa  89.4  3e-17  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00575971 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  32.68 
 
 
206 aa  89  3e-17  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_012856  Rpic12D_0259  response regulator receiver and ANTAR domain protein  37.5 
 
 
212 aa  88.6  6e-17  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0238  response regulator receiver and ANTAR domain protein  37.5 
 
 
212 aa  88.6  6e-17  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  32.9 
 
 
205 aa  87.4  1e-16  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_010515  Bcenmc03_5794  response regulator receiver/ANTAR domain-containing protein  37.25 
 
 
198 aa  87  1e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4144  response regulator receiver/ANTAR domain-containing protein  38.51 
 
 
201 aa  86.3  2e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.071014 
 
 
-
 
NC_008061  Bcen_3858  response regulator receiver/ANTAR domain-containing protein  36 
 
 
219 aa  86.7  2e-16  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.853052  n/a   
 
 
-
 
NC_008543  Bcen2424_4510  response regulator receiver/ANTAR domain-containing protein  36 
 
 
219 aa  86.7  2e-16  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.000166869  normal 
 
 
-
 
NC_007511  Bcep18194_B1340  response regulator receiver/ANTAR domain-containing protein  35.71 
 
 
198 aa  85.9  4e-16  Burkholderia sp. 383  Bacteria  normal  normal  0.579049 
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  33.99 
 
 
191 aa  85.9  4e-16  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  33.56 
 
 
191 aa  85.1  6e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_007520  Tcr_0769  response regulator receiver/ANTAR domain-containing protein  29.17 
 
 
214 aa  84.7  7e-16  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0679202  n/a   
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  32.07 
 
 
194 aa  83.6  0.000000000000002  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_006349  BMAA1090  response regulator NasT  33.77 
 
 
198 aa  83.6  0.000000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0864919  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0246  response regulator NasT  33.77 
 
 
198 aa  83.6  0.000000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0087  response regulator/ANTAR domain-containing protein  33.77 
 
 
198 aa  83.6  0.000000000000002  Burkholderia mallei SAVP1  Bacteria  normal  0.792302  n/a   
 
 
-
 
NC_008835  BMA10229_0333  response regulator NasT  33.77 
 
 
198 aa  83.6  0.000000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.169956  n/a   
 
 
-
 
NC_009075  BURPS668_A1759  response regulator/ANTAR domain-containing protein  33.77 
 
 
198 aa  83.6  0.000000000000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1670  response regulator/ANTAR domain-containing protein  33.77 
 
 
198 aa  83.6  0.000000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1255  response regulator/ANTAR domain-containing protein  33.77 
 
 
198 aa  83.6  0.000000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0422038  n/a   
 
 
-
 
NC_007650  BTH_II1167  response regulator NasT  33.77 
 
 
198 aa  82.8  0.000000000000003  Burkholderia thailandensis E264  Bacteria  normal  0.136185  n/a   
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  32.7 
 
 
206 aa  82.4  0.000000000000004  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  33.56 
 
 
198 aa  82.4  0.000000000000004  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  32.26 
 
 
210 aa  82  0.000000000000005  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  32.26 
 
 
210 aa  82  0.000000000000005  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  32.26 
 
 
210 aa  82  0.000000000000005  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  32.37 
 
 
201 aa  81.6  0.000000000000006  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  31.97 
 
 
220 aa  81.3  0.000000000000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  32.26 
 
 
229 aa  81.3  0.000000000000009  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  32.37 
 
 
201 aa  80.9  0.00000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  34.46 
 
 
199 aa  80.5  0.00000000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_007973  Rmet_0278  response regulator receiver/ANTAR domain-containing protein  33.79 
 
 
219 aa  80.1  0.00000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  34.31 
 
 
200 aa  80.1  0.00000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  32.26 
 
 
213 aa  80.5  0.00000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  30.2 
 
 
204 aa  79.3  0.00000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  34.01 
 
 
206 aa  79.3  0.00000000000003  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  28.72 
 
 
194 aa  78.6  0.00000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  33.33 
 
 
205 aa  78.6  0.00000000000006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0331  response regulator receiver:ANTAR  33.1 
 
 
214 aa  77.8  0.00000000000008  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  31.08 
 
 
229 aa  77.8  0.00000000000008  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  33.11 
 
 
199 aa  77.4  0.0000000000001  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  31.85 
 
 
189 aa  77.8  0.0000000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  33.09 
 
 
226 aa  77.4  0.0000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
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