182 homologs were found in PanDaTox collection
for query gene Mlg_1708 on replicon NC_008340
Organism: Alkalilimnicola ehrlichii MLHE-1



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008340  Mlg_1708  response regulator receiver/ANTAR domain-containing protein  100 
 
 
431 aa  865    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.667897 
 
 
-
 
NC_013889  TK90_0664  ANTAR domain protein with unknown sensor  42.49 
 
 
441 aa  316  6e-85  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.293281  normal  0.015345 
 
 
-
 
NC_009832  Spro_2910  response regulator receiver/ANTAR domain-containing protein  46.1 
 
 
426 aa  315  9.999999999999999e-85  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3521  ANTAR domain protein with unknown sensor  45 
 
 
426 aa  308  1.0000000000000001e-82  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0174  response regulator receiver/ANTAR domain-containing protein  37.12 
 
 
432 aa  286  5.999999999999999e-76  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2378  response regulator receiver/ANTAR domain-containing protein  42.12 
 
 
421 aa  285  8e-76  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2735  ANTAR domain protein with unknown sensor  40.95 
 
 
429 aa  278  2e-73  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0721448  n/a   
 
 
-
 
NC_013421  Pecwa_1538  ANTAR domain protein with unknown sensor  38.81 
 
 
429 aa  271  1e-71  Pectobacterium wasabiae WPP163  Bacteria  normal  0.585588  n/a   
 
 
-
 
NC_013422  Hneap_1118  ANTAR domain protein with unknown sensor  36.49 
 
 
427 aa  266  5.999999999999999e-70  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2508  ANTAR domain protein with unknown sensor  40.29 
 
 
427 aa  262  8.999999999999999e-69  Dickeya dadantii Ech703  Bacteria  normal  0.102211  n/a   
 
 
-
 
NC_012912  Dd1591_1437  ANTAR domain protein with unknown sensor  40.09 
 
 
429 aa  262  1e-68  Dickeya zeae Ech1591  Bacteria  normal  0.997771  n/a   
 
 
-
 
NC_011662  Tmz1t_1141  ANTAR domain protein with unknown sensor  36.54 
 
 
462 aa  238  2e-61  Thauera sp. MZ1T  Bacteria  normal  0.160464  n/a   
 
 
-
 
NC_011138  MADE_03665  nitrate-and nitrite-responsive positive regulator  34.04 
 
 
446 aa  209  9e-53  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6603  response regulator receiver/ANTAR domain-containing protein  36.32 
 
 
451 aa  205  1e-51  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.684771 
 
 
-
 
NC_008062  Bcen_5756  response regulator receiver/ANTAR domain-containing protein  36.47 
 
 
451 aa  204  3e-51  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.874095  n/a   
 
 
-
 
NC_008544  Bcen2424_6121  response regulator receiver/ANTAR domain-containing protein  36.47 
 
 
451 aa  204  3e-51  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.131957 
 
 
-
 
NC_007947  Mfla_0329  response regulator receiver/ANTAR domain-containing protein  32.65 
 
 
464 aa  186  8e-46  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2326  response regulator receiver/ANTAR domain-containing protein  31.68 
 
 
394 aa  174  1.9999999999999998e-42  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1114  methyl-accepting chemotaxis sensory transducer  30.38 
 
 
700 aa  99.8  9e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.655641 
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  27.72 
 
 
664 aa  97.8  3e-19  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
664 aa  96.7  8e-19  Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
664 aa  94  4e-18  Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  26.92 
 
 
664 aa  94  5e-18  Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_013512  Sdel_0377  Nitrate and nitrite sensing domain protein  27.17 
 
 
661 aa  90.9  4e-17  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.000413313  n/a   
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  29.07 
 
 
668 aa  90.9  4e-17  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  26.01 
 
 
664 aa  90.5  5e-17  Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  25.64 
 
 
664 aa  89.7  9e-17  Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  26.57 
 
 
664 aa  89.4  1e-16  Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  27.61 
 
 
666 aa  87  6e-16  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  26.1 
 
 
664 aa  86.3  9e-16  Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  25.48 
 
 
662 aa  83.6  0.000000000000007  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_007298  Daro_3695  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  27.51 
 
 
930 aa  82.4  0.00000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  22.35 
 
 
720 aa  82.8  0.00000000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  23.98 
 
 
720 aa  81.6  0.00000000000003  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  24.51 
 
 
658 aa  79.3  0.0000000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  25.67 
 
 
664 aa  77.8  0.0000000000003  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_013421  Pecwa_0492  methyl-accepting chemotaxis sensory transducer  27.45 
 
 
649 aa  76.6  0.0000000000008  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_0763  methyl-accepting chemotaxis protein  25.56 
 
 
661 aa  75.9  0.000000000001  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0413  methyl-accepting chemotaxis sensory transducer  26.67 
 
 
653 aa  75.1  0.000000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  24.09 
 
 
664 aa  74.7  0.000000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_009052  Sbal_1924  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
531 aa  73.2  0.00000000001  Shewanella baltica OS155  Bacteria  normal  0.666083  n/a   
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  28.64 
 
 
204 aa  71.6  0.00000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_009720  Xaut_1086  response regulator receiver/ANTAR domain-containing protein  31.76 
 
 
202 aa  72  0.00000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1251  methyl-accepting chemotaxis sensory transducer  27.97 
 
 
646 aa  70.5  0.00000000006  Dickeya zeae Ech1591  Bacteria  normal  0.457093  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  23.74 
 
 
662 aa  69.7  0.00000000009  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  28.05 
 
 
195 aa  69.3  0.0000000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  26.63 
 
 
195 aa  68.6  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  48.39 
 
 
195 aa  68.6  0.0000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  48.39 
 
 
195 aa  68.2  0.0000000002  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  25 
 
 
207 aa  68.2  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  27.97 
 
 
194 aa  67  0.0000000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  46.77 
 
 
195 aa  67  0.0000000007  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  25.1 
 
 
653 aa  65.9  0.000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  24.25 
 
 
653 aa  65.9  0.000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_010505  Mrad2831_2302  response regulator receiver/ANTAR domain-containing protein  32.26 
 
 
195 aa  66.2  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.874561 
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  28.35 
 
 
202 aa  66.2  0.000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  27.27 
 
 
194 aa  65.5  0.000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2959  response regulator receiver/ANTAR domain-containing protein  37.89 
 
 
192 aa  65.5  0.000000002  Caulobacter sp. K31  Bacteria  normal  normal  0.793007 
 
 
-
 
NC_009952  Dshi_1661  transcription antitermination regulatory protein  49.21 
 
 
194 aa  65.5  0.000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00275655 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  27.46 
 
 
196 aa  65.1  0.000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  25.56 
 
 
196 aa  64.7  0.000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  25.1 
 
 
661 aa  63.9  0.000000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0588  response regulator NasT  48.39 
 
 
191 aa  63.5  0.000000006  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_007778  RPB_1762  response regulator receiver/ANTAR domain-containing protein  26.57 
 
 
194 aa  63.9  0.000000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.48447  normal  0.0125916 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  27.97 
 
 
196 aa  63.2  0.000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_010505  Mrad2831_1563  methyl-accepting chemotaxis sensory transducer  30.68 
 
 
682 aa  62.4  0.00000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.543621  normal  0.0909129 
 
 
-
 
NC_011757  Mchl_4261  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
679 aa  62  0.00000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.131059  normal  0.834811 
 
 
-
 
NC_010172  Mext_3893  nitrate and nitrite sensing domain-containing protein  32.27 
 
 
679 aa  62  0.00000002  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.252207 
 
 
-
 
NC_003910  CPS_3317  putative response regulator NasT  31.2 
 
 
201 aa  61.6  0.00000003  Colwellia psychrerythraea 34H  Bacteria  normal  0.0234612  n/a   
 
 
-
 
NC_012856  Rpic12D_0259  response regulator receiver and ANTAR domain protein  30.95 
 
 
212 aa  61.6  0.00000003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0238  response regulator receiver and ANTAR domain protein  30.16 
 
 
212 aa  60.8  0.00000004  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0458  putative sensor with HAMP domain  30.91 
 
 
1092 aa  60.5  0.00000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2657  methyl-accepting chemotaxis sensory transducer  25.42 
 
 
646 aa  60.5  0.00000005  Dickeya dadantii Ech703  Bacteria  normal  0.653915  n/a   
 
 
-
 
NC_008340  Mlg_1091  diguanylate cyclase/phosphodiesterase  27.6 
 
 
768 aa  60.5  0.00000006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.107307  normal 
 
 
-
 
NC_009511  Swit_1703  response regulator receiver/ANTAR domain-containing protein  38.55 
 
 
193 aa  60.5  0.00000006  Sphingomonas wittichii RW1  Bacteria  normal  0.242071  normal 
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  43.24 
 
 
224 aa  60.1  0.00000008  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_003295  RSc0382  response regulator transcription regulator protein  30.95 
 
 
195 aa  59.3  0.0000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.846144 
 
 
-
 
NC_010524  Lcho_2675  response regulator receiver/ANTAR domain-containing protein  35.11 
 
 
383 aa  59.3  0.0000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_4364  methyl-accepting chemotaxis sensory transducer  30.52 
 
 
694 aa  57.4  0.0000005  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_23450  response regulator NasT  45.16 
 
 
192 aa  56.6  0.0000007  Azotobacter vinelandii DJ  Bacteria  normal  0.212044  n/a   
 
 
-
 
NC_008463  PA14_41490  hypothetical protein  46.88 
 
 
192 aa  56.6  0.0000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3519  hypothetical protein  46.88 
 
 
192 aa  56.6  0.0000008  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0331  response regulator receiver:ANTAR  46.97 
 
 
214 aa  56.2  0.000001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2149  response regulator receiver/ANTAR domain-containing protein  37.65 
 
 
208 aa  55.8  0.000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  35.56 
 
 
210 aa  56.2  0.000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  24.47 
 
 
221 aa  55.8  0.000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_007794  Saro_2973  response regulator receiver/ANTAR domain-containing protein  30.51 
 
 
217 aa  55.1  0.000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  32.61 
 
 
212 aa  55.1  0.000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_01489  histidine kinase/response regulator hybrid protein  43.08 
 
 
83 aa  55.5  0.000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  34.44 
 
 
206 aa  54.7  0.000003  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  34.44 
 
 
206 aa  54.7  0.000003  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_007908  Rfer_2553  response regulator receiver/ANTAR domain-containing protein  44.07 
 
 
215 aa  54.3  0.000004  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2581  response regulator receiver/ANTAR domain-containing protein  45.16 
 
 
192 aa  54.3  0.000004  Pseudomonas mendocina ymp  Bacteria  normal  0.298585  hitchhiker  0.00648362 
 
 
-
 
NC_010581  Bind_1968  response regulator receiver/ANTAR domain-containing protein  33.98 
 
 
193 aa  54.3  0.000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1383  methyl-accepting chemotaxis sensory transducer  24.07 
 
 
705 aa  53.9  0.000005  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  24.8 
 
 
653 aa  53.9  0.000006  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_008825  Mpe_A2314  response regulator  42.86 
 
 
426 aa  53.5  0.000007  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  45.45 
 
 
243 aa  53.1  0.000008  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1784  response regulator receiver  43.55 
 
 
191 aa  53.1  0.000009  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  41.11 
 
 
191 aa  53.1  0.000009  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>