| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3521 |
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| Symbol | |
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| ID | 7972147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3711779 |
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| End bp | 3713059 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794106 |
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| Product | ANTAR domain protein with unknown sensor |
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| Protein accession | YP_002945404 |
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| Protein GI | 239816494 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCG GACTGAGTTT TCTGATCGCC GCCAGAAAGT GCGAAATCGA CGAGCTGGAC
CAGCTCGCGC GCACCAGCGA GCTGGTCGGC CTGATCGCGC GGCTGGTCCA TGCGCTGCAG
CGGGAGCGCG GCATGTCCAA CCTGTTCCTC GCCTCGCGCG GCGGCCGCTT CGCCGAGCAG
CGCGATCCGC AGATCGCCGA ATGCCTGGCG CTCGAGCAGG AGGTGCGTGC CGGATTCGAC
CAGCTCGAGA CCGAAGCGCA CCCCGGCGCC ACCGCCGGCA ACAGCGCCCG CCTCTTCAGC
CGCATTGCCT GGGTGCTTCC GGGGCTGGAC GGCCTGCCCG CCCTGCGCCG GCGCATCGGC
GCGCTCGAGC TGACGCCCGC GCAGGCCACC GCGGCCTTCG CCAAGCTGGT TGCCGGCCTG
CTGGCGGTGG TGTTCGAGGC GGCCGACGGC GCCACCGATC CCGAGATCTC GCGCCTGCTG
GTGGCGATGT TCAACTTCAT GCAGGGCAAG GAATTTGCCG GCCAGGAGCG CGCCTTCGGC
GCCGCCTCGC TGGCGCTGGG CCGCGGCGAC GAGGCGCAGC GCCAGCAATG GCTGCACCTC
ATCGAACTGC AGGAGCGCTG CTTCCAGGTC TTCACCGACT TTTCGAGCAG CGGCGTGCTG
GCGCTCTGGC ACCAAAGCCA GTCCGAGGCC GTCATGGCCG AGATCGAGCG CCAGCGCCGC
ATGAGCGTGA GCTCGGCGCA GGCGGCTTCG GCGGCCGCGC CCGACCCCCG GCTGAGCCAG
GCCTGGTTCG ACTGGTGCAC GCGCCGCATC GACGCCATGA AGACCGTCGA GGACCGGCTG
GCCGCCGACC TGCGCGAGCT CTGCGCCCAC AAGACCGCGC AGGCGCGCAG CGAGCTGCAG
CGCTACCAGC AGGTGCTCGG CAACCTGGCG CCGGAGCCCG AGGGCGCGGT GTTCTTCGAC
GACGCCGACA CCCGGGCCAC CGAGCCCGCG CAGTACGGCC GCCACCTGGA GCGCTCGGTG
CTCGACATGG TCCAGGAGCA GTCGCGCCGG CTGCAGGCCA TGGGCGACGA GCTCGAAACC
GTGCGCGCTT CCCTCAACGA GCGCAAGCTG GTCGAGCGCG CCAAGGGTCT GCTGATGGCG
CACCGCCGCA TGAGCGAGAA CGAGGCGCAC AAGATGCTGC TGCAGACGGC CATGAACCAG
AAGCGCCGCC TGGTCGACGT GGCCGAGTCG ATGCTCGCCA TGGCCGACTA CCTGCCGCTC
GATGCAGCGC CCCGGCGCTG A
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| Protein sequence | MKSGLSFLIA ARKCEIDELD QLARTSELVG LIARLVHALQ RERGMSNLFL ASRGGRFAEQ
RDPQIAECLA LEQEVRAGFD QLETEAHPGA TAGNSARLFS RIAWVLPGLD GLPALRRRIG
ALELTPAQAT AAFAKLVAGL LAVVFEAADG ATDPEISRLL VAMFNFMQGK EFAGQERAFG
AASLALGRGD EAQRQQWLHL IELQERCFQV FTDFSSSGVL ALWHQSQSEA VMAEIERQRR
MSVSSAQAAS AAAPDPRLSQ AWFDWCTRRI DAMKTVEDRL AADLRELCAH KTAQARSELQ
RYQQVLGNLA PEPEGAVFFD DADTRATEPA QYGRHLERSV LDMVQEQSRR LQAMGDELET
VRASLNERKL VERAKGLLMA HRRMSENEAH KMLLQTAMNQ KRRLVDVAES MLAMADYLPL
DAAPRR
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