127 homologs were found in PanDaTox collection
for query gene Bcen2424_6121 on replicon NC_008544
Organism: Burkholderia cenocepacia HI2424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008062  Bcen_5756  response regulator receiver/ANTAR domain-containing protein  100 
 
 
451 aa  895    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.874095  n/a   
 
 
-
 
NC_008544  Bcen2424_6121  response regulator receiver/ANTAR domain-containing protein  100 
 
 
451 aa  895    Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.131957 
 
 
-
 
NC_010512  Bcenmc03_6603  response regulator receiver/ANTAR domain-containing protein  98.89 
 
 
451 aa  886    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.684771 
 
 
-
 
NC_010002  Daci_2378  response regulator receiver/ANTAR domain-containing protein  40.52 
 
 
421 aa  258  1e-67  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0664  ANTAR domain protein with unknown sensor  39.05 
 
 
441 aa  236  5.0000000000000005e-61  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.293281  normal  0.015345 
 
 
-
 
NC_007947  Mfla_0329  response regulator receiver/ANTAR domain-containing protein  34.29 
 
 
464 aa  225  1e-57  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3521  ANTAR domain protein with unknown sensor  36.64 
 
 
426 aa  225  1e-57  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1538  ANTAR domain protein with unknown sensor  35.84 
 
 
429 aa  215  9.999999999999999e-55  Pectobacterium wasabiae WPP163  Bacteria  normal  0.585588  n/a   
 
 
-
 
NC_012917  PC1_2735  ANTAR domain protein with unknown sensor  36.53 
 
 
429 aa  213  7.999999999999999e-54  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0721448  n/a   
 
 
-
 
NC_008740  Maqu_0174  response regulator receiver/ANTAR domain-containing protein  32.46 
 
 
432 aa  207  3e-52  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03665  nitrate-and nitrite-responsive positive regulator  33.81 
 
 
446 aa  201  1.9999999999999998e-50  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1118  ANTAR domain protein with unknown sensor  32.04 
 
 
427 aa  198  2.0000000000000003e-49  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1708  response regulator receiver/ANTAR domain-containing protein  36.47 
 
 
431 aa  193  5e-48  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.667897 
 
 
-
 
NC_012880  Dd703_2508  ANTAR domain protein with unknown sensor  36.69 
 
 
427 aa  189  5.999999999999999e-47  Dickeya dadantii Ech703  Bacteria  normal  0.102211  n/a   
 
 
-
 
NC_009832  Spro_2910  response regulator receiver/ANTAR domain-containing protein  35.36 
 
 
426 aa  182  7e-45  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1437  ANTAR domain protein with unknown sensor  34.17 
 
 
429 aa  179  1e-43  Dickeya zeae Ech1591  Bacteria  normal  0.997771  n/a   
 
 
-
 
NC_011662  Tmz1t_1141  ANTAR domain protein with unknown sensor  35.63 
 
 
462 aa  175  1.9999999999999998e-42  Thauera sp. MZ1T  Bacteria  normal  0.160464  n/a   
 
 
-
 
NC_009436  Ent638_2326  response regulator receiver/ANTAR domain-containing protein  29.76 
 
 
394 aa  129  1.0000000000000001e-28  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1114  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
700 aa  98.2  3e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.655641 
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  23.92 
 
 
662 aa  88.2  3e-16  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_003910  CPS_0763  methyl-accepting chemotaxis protein  28.69 
 
 
661 aa  85.1  0.000000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0377  Nitrate and nitrite sensing domain protein  27.24 
 
 
661 aa  84.7  0.000000000000003  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.000413313  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  25.95 
 
 
661 aa  84.7  0.000000000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  24.91 
 
 
666 aa  82.8  0.00000000000001  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  21.72 
 
 
720 aa  82.4  0.00000000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0492  methyl-accepting chemotaxis sensory transducer  25.91 
 
 
649 aa  82.4  0.00000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0413  methyl-accepting chemotaxis sensory transducer  25.2 
 
 
653 aa  81.3  0.00000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  26.32 
 
 
653 aa  80.9  0.00000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_012912  Dd1591_1251  methyl-accepting chemotaxis sensory transducer  27.97 
 
 
646 aa  81.3  0.00000000000004  Dickeya zeae Ech1591  Bacteria  normal  0.457093  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  25.28 
 
 
662 aa  77  0.0000000000006  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  23.02 
 
 
720 aa  76.6  0.0000000000009  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  25.68 
 
 
658 aa  75.9  0.000000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_011757  Mchl_4261  methyl-accepting chemotaxis sensory transducer  29.2 
 
 
679 aa  73.2  0.000000000009  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.131059  normal  0.834811 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  26.67 
 
 
653 aa  72.8  0.00000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_008340  Mlg_1091  diguanylate cyclase/phosphodiesterase  29.28 
 
 
768 aa  71.6  0.00000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.107307  normal 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  28.69 
 
 
653 aa  71.6  0.00000000002  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_007298  Daro_3695  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  28.35 
 
 
930 aa  71.2  0.00000000004  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  22.89 
 
 
664 aa  67.8  0.0000000004  Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  23.86 
 
 
664 aa  67.8  0.0000000004  Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_010172  Mext_3893  nitrate and nitrite sensing domain-containing protein  28.47 
 
 
679 aa  65.1  0.000000002  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.252207 
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  23.69 
 
 
664 aa  64.3  0.000000004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_012880  Dd703_2657  methyl-accepting chemotaxis sensory transducer  24.05 
 
 
646 aa  64.3  0.000000004  Dickeya dadantii Ech703  Bacteria  normal  0.653915  n/a   
 
 
-
 
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  24.71 
 
 
664 aa  63.9  0.000000005  Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  22.54 
 
 
664 aa  63.5  0.000000008  Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_010505  Mrad2831_1563  methyl-accepting chemotaxis sensory transducer  29.32 
 
 
682 aa  63.5  0.000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.543621  normal  0.0909129 
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  24.71 
 
 
664 aa  63.2  0.00000001  Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  24.32 
 
 
664 aa  61.2  0.00000003  Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  22.09 
 
 
664 aa  61.6  0.00000003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  24.08 
 
 
668 aa  61.2  0.00000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  23.94 
 
 
664 aa  61.2  0.00000004  Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  50 
 
 
195 aa  59.3  0.0000001  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  46.67 
 
 
195 aa  58.5  0.0000002  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  46.67 
 
 
195 aa  58.5  0.0000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  23.89 
 
 
664 aa  58.2  0.0000003  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_010725  Mpop_4364  methyl-accepting chemotaxis sensory transducer  27.54 
 
 
694 aa  56.6  0.0000008  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  50.94 
 
 
197 aa  55.1  0.000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009952  Dshi_1661  transcription antitermination regulatory protein  41.03 
 
 
194 aa  55.1  0.000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.00275655 
 
 
-
 
NC_010505  Mrad2831_2302  response regulator receiver/ANTAR domain-containing protein  46.67 
 
 
195 aa  54.7  0.000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.874561 
 
 
-
 
NC_013595  Sros_1797  hypothetical protein  26.55 
 
 
950 aa  53.9  0.000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1211  response regulator receiver/ANTAR domain-containing protein  45 
 
 
194 aa  53.5  0.000007  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  44.74 
 
 
198 aa  52.4  0.00002  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_007575  Suden_0988  methyl-accepting chemotaxis sensory transducer  22.05 
 
 
652 aa  51.6  0.00003  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0813  integral membrane sensor signal transduction histidine kinase  23.75 
 
 
1119 aa  50.8  0.00004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.067118 
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  43.1 
 
 
191 aa  50.8  0.00004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_007802  Jann_3038  response regulator receiver/ANTAR domain-containing protein  44.07 
 
 
206 aa  50.8  0.00005  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1383  methyl-accepting chemotaxis sensory transducer  21.81 
 
 
705 aa  50.8  0.00005  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  35.48 
 
 
195 aa  50.4  0.00006  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_011004  Rpal_4227  response regulator receiver and ANTAR domain protein  39.39 
 
 
194 aa  50.4  0.00006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0711042  n/a   
 
 
-
 
NC_007404  Tbd_2271  response regulator receiver domain-containing protein  34.33 
 
 
188 aa  50.4  0.00007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.187486  normal 
 
 
-
 
NC_013093  Amir_0458  putative sensor with HAMP domain  21.74 
 
 
1092 aa  49.3  0.0001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3706  methyl-accepting chemotaxis sensory transducer  28.97 
 
 
684 aa  49.3  0.0001  Methylobacterium sp. 4-46  Bacteria  normal  0.677815  hitchhiker  0.00614515 
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  44.83 
 
 
202 aa  49.7  0.0001  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_003295  RSc0382  response regulator transcription regulator protein  47.17 
 
 
195 aa  48.5  0.0002  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.846144 
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  41.79 
 
 
208 aa  48.5  0.0002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  42.11 
 
 
206 aa  48.5  0.0002  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  36.25 
 
 
221 aa  49.3  0.0002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_009784  VIBHAR_05586  hypothetical protein  33.82 
 
 
193 aa  48.9  0.0002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010682  Rpic_0238  response regulator receiver and ANTAR domain protein  45.28 
 
 
212 aa  48.5  0.0002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  42.11 
 
 
206 aa  48.5  0.0002  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  43.1 
 
 
207 aa  48.5  0.0002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_007778  RPB_1762  response regulator receiver/ANTAR domain-containing protein  39.39 
 
 
194 aa  48.1  0.0003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.48447  normal  0.0125916 
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  39.44 
 
 
198 aa  48.5  0.0003  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  41.38 
 
 
196 aa  48.1  0.0003  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  41.38 
 
 
195 aa  48.1  0.0003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_012856  Rpic12D_0259  response regulator receiver and ANTAR domain protein  45.28 
 
 
212 aa  48.5  0.0003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  43.1 
 
 
204 aa  48.1  0.0003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_013159  Svir_34340  nitrate/nitrite-sensing histidine kinase with HAMP domain protein  24.09 
 
 
879 aa  47.8  0.0004  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2264  putative GAF sensor protein  34 
 
 
236 aa  47.4  0.0005  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2959  response regulator receiver/ANTAR domain-containing protein  44.64 
 
 
192 aa  47.4  0.0006  Caulobacter sp. K31  Bacteria  normal  normal  0.793007 
 
 
-
 
NC_011312  VSAL_I0920  nitrate and nitrite sensing methyl-accepting chemotaxis protein  26.11 
 
 
662 aa  47.4  0.0006  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5900  two component response regulator  37.93 
 
 
195 aa  47  0.0006  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  41.27 
 
 
243 aa  47  0.0006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001606  putative two-component response regulatory protein  32.35 
 
 
193 aa  47  0.0007  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2589  Fis family transcriptional regulator  46.67 
 
 
208 aa  47  0.0007  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0488842 
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  42.47 
 
 
210 aa  47  0.0007  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_009720  Xaut_1086  response regulator receiver/ANTAR domain-containing protein  44.23 
 
 
202 aa  47  0.0007  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1968  response regulator receiver/ANTAR domain-containing protein  47.06 
 
 
193 aa  47  0.0008  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1262  response regulator receiver/ANTAR domain-containing protein  44.83 
 
 
193 aa  46.2  0.001  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.425993  normal 
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  43.4 
 
 
196 aa  46.6  0.001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  41.67 
 
 
207 aa  46.6  0.001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
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