Gene VIBHAR_05586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05586 
Symbol 
ID5558820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp790785 
End bp791366 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content45% 
IMG OID640910062 
Producthypothetical protein 
Protein accessionYP_001447716 
Protein GI156976810 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAT CAACGTCAAA AACACCCATT ATAGTATGCT GCGATAGCCT CCAAGAGCAG 
GCTCGATTGT CCGGTTTGTT GAGCAAAGAT TACGACAACA TCATTGGCTG CCAATTGGCA 
CAACTAGAAA CGCTTATGCA GCGAGAACCG TCAGCAAGCG TTGTGGTTGG ATGGCAGCAA 
CCAACCGCGG AACTGCGTTT GATCGTCGAT TTCTGCCGCA GAAAATCGGC ACCACTTCTT 
ATCGTTTTAA AGCAGTTATC ATCTAATGAT ATCAATCGGT TATCGGAAAA AATGGACTAT 
GTGCTCATGC CGCATGATAG TGAGTTTGCA CTTCAACCTT GGATTGAACA TGCGACATTA 
GTGAGAGCGA AATTCGAAAG TATGCAATCG GAAATTGAAT CGCTGACCCA CAAGATTGAA 
GAGCGCAAGC TGGTGGAAAA AGCTAAAGGT CTGCTGATGA AGATGCACAG CGTTGATGAA 
GATCAGGCTT ATAAAGCGCT TAGAAATTCA GCCATGCAAT CGAGCCAAAC GCTCGCACAA 
GTTGCCAAGA ATTTGATAAC TACTTTGGAA GTGTTGGATT AG
 
Protein sequence
MTQSTSKTPI IVCCDSLQEQ ARLSGLLSKD YDNIIGCQLA QLETLMQREP SASVVVGWQQ 
PTAELRLIVD FCRRKSAPLL IVLKQLSSND INRLSEKMDY VLMPHDSEFA LQPWIEHATL 
VRAKFESMQS EIESLTHKIE ERKLVEKAKG LLMKMHSVDE DQAYKALRNS AMQSSQTLAQ 
VAKNLITTLE VLD