Gene Dole_2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2264 
Symbol 
ID5695112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2740103 
End bp2740813 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content59% 
IMG OID641264870 
Productputative GAF sensor protein 
Protein accessionYP_001530145 
Protein GI158522275 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTATT CAGATATCCA GGACGCGGAC AAGTATATCA AGGCACTGGC CCAGATCAGC 
CGGGCCATCA CCTCTGAGCA GTACCTGGAG GACATTCTCA AACTCATCGT CATGGTCACG
GCAAAAGTCA CGGGCGTTGA GATCTGCTCT CTGTGGATTA TTGAGGAGGA AGAGGGGGAG
AAAGTGATCC GGCTCAAGGC CACCCAGGCC ATTGACCAGG TCTACCTTAA AAACCGCAGC
CTGCGCATGA ACGAGGGGGT GGTGGGATAC GTGGCCACCC ACAGGGTTCC CATCATCATT
CCCAATGTCC TGCAGGAGCC CCGTTTCAAG GAAAAGGAGA TGGCCCGGCA GCTGGGCCTG
GTCTCCATGG TGGGCATCCC CATGCAGGTC CGCGACGAAG AGGTGACCGG CGTGCTCAAC
TGCTTCACCG CCGCGCCCCA TGATTTTCCC GAAACCGAGG TCAACCTGAT CACCGCCGTG
GCCAACCAGG CGGCCGTTGC CATCCACAAC ACCAAGCTGA TGGTGGATGC CCAGATTATC
CGCGAGGAGC TGGAGAGCCG GAAGCTGATC GAGCGGGCCA AGGAGGTGAT TGTGCGCAGG
GGAAAAATGA ACATGGAGGA GGCTTACCGC TGGATTCGCA AGCGCAGCAT GGACACCCGC
AAATCCATGC GGGACGTGGC CGAGGCCGTG CTGCTCTCCG AGGAGTTATA A
 
Protein sequence
MPYSDIQDAD KYIKALAQIS RAITSEQYLE DILKLIVMVT AKVTGVEICS LWIIEEEEGE 
KVIRLKATQA IDQVYLKNRS LRMNEGVVGY VATHRVPIII PNVLQEPRFK EKEMARQLGL
VSMVGIPMQV RDEEVTGVLN CFTAAPHDFP ETEVNLITAV ANQAAVAIHN TKLMVDAQII
REELESRKLI ERAKEVIVRR GKMNMEEAYR WIRKRSMDTR KSMRDVAEAV LLSEEL