| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3695 |
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| Symbol | |
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| ID | 3567907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3971258 |
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| End bp | 3974050 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637682168 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_286894 |
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| Protein GI | 71909307 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATTG AAAACAGTCC GCAAAGCAAT GTGCCAAGAG CTCCACCAAG CTCTCTTGGG
CCCATTCGAC GCAATGCCAC TTGGGTGCTG ATCGTTTTTC TTTTGGCGCT CTCATTTTTC
GCGATACATA GCTTGGTCGA GCGCTTCGAC CAGTTGCGGA ATGCAAGCCT TGATCGAAAA
TGGATGGGAG CGAATGGGGC GATTAGTCGG CTTATCCACG AACTACAACG CGAGCGGGGG
TTTTCCAGCG GCTTTATCGC TTCTCGAGGT GAGCGTTTTG GCGAATCGCT AGTGACGCAG
CAGATTCGGA CAGATGGTTC GCTGAATGAA TTGAAATCAA TCATTCGCGA ACATGCCATG
GATCAGGCCC TCCAGCGAAG CCTCGATGCA GGATGGGGGC AGCTCCAGGA GCTTCGGCCT
CGGGTAAAGA GTCTCGAGCT ATCGCGTGAT TACACGGTCG ACCGTTATAC GTGGATTATT
GACACGCTGT TTGACCTGCA ATTGAGCTCC TTCGGCAGCG CCATCGAGTC TTCGATCTTC
CGCAAGCAAA TGGCCTTTAT TGCCTTTTCC CAGGCCAAAG AGATGTTGGG GCAGGAAAGA
GCGTTGCTAT CGGCGATCCT GTCCGATCAC AACTTCAGTG CAGGCCGGAT GCTGACGTTA
AACAATATCC GGGCCACGGA GCAGGCTCGT CTGGCCAACT TCGTCCGCCT GGCCGATGCA
GAAACGGCGG CCAGGTATCG CGAAATTCTG GCCCAGCCCG ACATCAAGGA CGCTGAGCGT
ATCCGGCAAA AGATCAAGGC CGTTGCCTTT TGGGAGGAGT CGCACGGCAG CATGTCGACC
ACCGAGGCTT TATCCATATC GTTACCGACA CCGGAAATGT GGTTTGAAGT CTCAACCGCA
AAAATCGATG CCATGAAGGC CCTTGAGGAT CGGTTAAATG CCTCGCTCGG CGTCAGTGCC
GAACAGGTCG AAAAACGCGC CTGGAAAGAA CTCTCGATCA GCGGTTTGTT GGTACTTCTG
GCTTTCATGC TGGCGGGAAT TCTGATTCGC CAGATTCAAC GCGGTCGTCG CGTGGCCGAA
CACCAACTCA ATCTTGCTGA AGCCGTTTTT GCGAATAGCG TTGAATCCAT TCTGGTCACC
GATGCCGACC AGCGGATCGT CGAAGTCAAT CCCGCCTTCC TGAGAATCTC TGGTTATAGC
CGCTCGGAAA TCATCGGCCA GCATCCGCGC ATCCTCAAGT CCGGTCGGCA CGATGCGGCT
TTCTTCGCAA GGATGTGGCA AGAACTTAAC GCTAATGACA CCTGGGAAGG GGAGGTCTGG
AATCGGCGAA AGAATGGTGA GATTTATCCG GCCTTGCTTT CGATTGCCGT GGTGAGAAGT
CAGGACGGAA AGGTTGTGAA CTACACGGGG ATGATTTTCG ACCTCAGTCA GCAAAAGACG
GTCGAGGCAC TACTGGATCA ACTCAGAACC TTTGATGGAC TGACCGCTCT TCCCAATCGG
GAATCCTGGC TTTCAGCCCT TGAGCAGCAG TTGGCCAATG CGAAAAGAAA CAGCAGCCGA
TTTTCAATAC TTCAGCTCGA CCTTGATCGT TTCAAGGCGA TCAATGACTC AATGGGTTAT
TCAGTCGGCG ATCAGGTGCT GATCGAGGCG GCGGAGCGGG TCAAGGTTTC CCTGCGAAAA
TACGACATCG TGGCCCGCCT TGGGGGCAAC CGCTTCTCGA TATTGCTCAA CGAAATTGTT
GATCCTCAGA CCATCGGCGG CATTTGCGAA AAGCTGCTCA CCGCTTTTGC ACGCCCATTT
CAAATGGGCG GCATCAACGC GCATATCAGT GCCAGTATCG GGGTCGCCAT CTTTCCGAAT
GACGGCCTAG ACAGCAAGAC ACTAATGATG GCGGCGGAGT CTGCCTTATA TAGCGCCAAG
GCCGACGGCC GCAATTTATA CAAATATTAC TCGCACGAAA TGAACGAGAT GGGCACCCAT
CTTTTCAAGC TCGAACGCAT GTTGCGAGTG GCGCTGGATC GCAACGAGTT TTCGGTCGTC
TATCAGCCAC AGGTCAACGC AAAAAATGGC GAATTGGTTG GCGTCGAAGC CTTGTTGCGC
TGGCATAACC CGGAATTGGG CAATGTCTCA GCTGTCCAGT TCATACCTGT CGCAGAAGAA
ACCGGGCTCA TTGTTTCGAT TGGTGAATGG GTTATGCGGG CAGCCTGTCA TCAGGCGCGA
ACATGGCAGA CCGAATTGGG GTTTGAAATT CCGGTTGCCG TTAACCTCTC GGCTCGCCAA
TTTCGTCGCA ATGACCTCTT GGCCTCGGTA CAAACGATTC TCGACGAAAC TGGCTTGCCT
AATCGCCTAT TGGAGCTGGA AATCACTGAA GGCTCGCTGA TCGTTGATCC GATTGGCGCC
ATCGATATCA TGCGCGGCCT CAACTGCCTC GGCATCAAGA CAGCGCTTGA TGATTTCGGC
ACTGGGTATT CATCGTTAGC CTATCTCAAA GCATTTCCAT TGAATCGCTT GAAAATTGAC
CGCGCCTTTG TCCGTGACTT GCCAGACAAT GAAAGCGATT GTGCCATCTC GAATACCATC
ATCGCCCTGG GCCTCAACCT CAATATGGAA GTCTTGGCCG AGGGGGTCGA AACAGAAGCC
CAGCGTGACT TCCTGGCCGC CGCGGGGTGC CAGGTATTCC AAGGGTATTT GTTTGGCAAG
CCAATGTCCG GCGAAGACTT AACGCAACGT TTGCAATCAG GAAACCTGAT CGCTCCACGA
TGCAGCGCAA GTTCCGGTAT CAGCGATGCT TAG
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| Protein sequence | MPIENSPQSN VPRAPPSSLG PIRRNATWVL IVFLLALSFF AIHSLVERFD QLRNASLDRK
WMGANGAISR LIHELQRERG FSSGFIASRG ERFGESLVTQ QIRTDGSLNE LKSIIREHAM
DQALQRSLDA GWGQLQELRP RVKSLELSRD YTVDRYTWII DTLFDLQLSS FGSAIESSIF
RKQMAFIAFS QAKEMLGQER ALLSAILSDH NFSAGRMLTL NNIRATEQAR LANFVRLADA
ETAARYREIL AQPDIKDAER IRQKIKAVAF WEESHGSMST TEALSISLPT PEMWFEVSTA
KIDAMKALED RLNASLGVSA EQVEKRAWKE LSISGLLVLL AFMLAGILIR QIQRGRRVAE
HQLNLAEAVF ANSVESILVT DADQRIVEVN PAFLRISGYS RSEIIGQHPR ILKSGRHDAA
FFARMWQELN ANDTWEGEVW NRRKNGEIYP ALLSIAVVRS QDGKVVNYTG MIFDLSQQKT
VEALLDQLRT FDGLTALPNR ESWLSALEQQ LANAKRNSSR FSILQLDLDR FKAINDSMGY
SVGDQVLIEA AERVKVSLRK YDIVARLGGN RFSILLNEIV DPQTIGGICE KLLTAFARPF
QMGGINAHIS ASIGVAIFPN DGLDSKTLMM AAESALYSAK ADGRNLYKYY SHEMNEMGTH
LFKLERMLRV ALDRNEFSVV YQPQVNAKNG ELVGVEALLR WHNPELGNVS AVQFIPVAEE
TGLIVSIGEW VMRAACHQAR TWQTELGFEI PVAVNLSARQ FRRNDLLASV QTILDETGLP
NRLLELEITE GSLIVDPIGA IDIMRGLNCL GIKTALDDFG TGYSSLAYLK AFPLNRLKID
RAFVRDLPDN ESDCAISNTI IALGLNLNME VLAEGVETEA QRDFLAAAGC QVFQGYLFGK
PMSGEDLTQR LQSGNLIAPR CSASSGISDA
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