More than 300 homologs were found in PanDaTox collection
for query gene TDE1009 on replicon NC_002967
Organism: Treponema denticola ATCC 35405



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002967  TDE0178  methyl-accepting chemotaxis protein  64.15 
 
 
696 aa  860    Treponema denticola ATCC 35405  Bacteria  unclonable  0.0000210736  n/a   
 
 
-
 
NC_002967  TDE0181  methyl-accepting chemotaxis protein  64.42 
 
 
696 aa  890    Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.00160845  n/a   
 
 
-
 
NC_002967  TDE0484  methyl-accepting chemotaxis protein  55.68 
 
 
706 aa  741    Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.00175726  n/a   
 
 
-
 
NC_002967  TDE0619  methyl-accepting chemotaxis protein  65.57 
 
 
696 aa  882    Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.00139031  n/a   
 
 
-
 
NC_002967  TDE0850  methyl-accepting chemotaxis protein  57.37 
 
 
721 aa  752    Treponema denticola ATCC 35405  Bacteria  unclonable  0.0000224033  n/a   
 
 
-
 
NC_002967  TDE1009  methyl-accepting chemotaxis protein  100 
 
 
697 aa  1407    Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2142  methyl-accepting chemotaxis protein  61.76 
 
 
712 aa  637    Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2270  methyl-accepting chemotaxis protein  55.6 
 
 
699 aa  723    Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.000173504  n/a   
 
 
-
 
NC_002967  TDE2549  methyl-accepting chemotaxis protein  67.96 
 
 
699 aa  925    Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.0016673  n/a   
 
 
-
 
NC_002967  TDE2783  methyl-accepting chemotaxis protein  58.06 
 
 
705 aa  759    Treponema denticola ATCC 35405  Bacteria  normal  0.260069  n/a   
 
 
-
 
NC_002967  TDE1284  methyl-accepting chemotaxis protein, putative  49.93 
 
 
707 aa  628  1e-178  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0345  methyl-accepting chemotaxis protein DmcB  74.74 
 
 
410 aa  565  1e-160  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0640  methyl-accepting chemotaxis protein  47.72 
 
 
744 aa  451  1e-125  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0072  methyl-accepting chemotaxis protein  50.98 
 
 
712 aa  368  1e-100  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0347  methyl-accepting chemotaxis protein DmcA  37.95 
 
 
729 aa  346  7e-94  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1054  methyl-accepting chemotaxis protein  37.98 
 
 
692 aa  261  3e-68  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.00043245  n/a   
 
 
-
 
NC_002967  TDE1386  methyl-accepting chemotaxis protein  40 
 
 
611 aa  252  2e-65  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0346  protease PrtB  48.4 
 
 
274 aa  240  8e-62  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.51 
 
 
650 aa  236  7e-61  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_014150  Bmur_1338  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
957 aa  190  9e-47  Brachyspira murdochii DSM 12563  Bacteria  normal  0.578016  n/a   
 
 
-
 
NC_011830  Dhaf_4543  methyl-accepting chemotaxis sensory transducer  26.38 
 
 
663 aa  189  2e-46  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.113755  n/a   
 
 
-
 
NC_008346  Swol_2151  putative methyl-accepting chemotaxis sensory transducer  26.04 
 
 
656 aa  182  2e-44  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0516  methyl-accepting chemotaxis sensory transducer  28.25 
 
 
664 aa  181  5.999999999999999e-44  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0344435  n/a   
 
 
-
 
NC_008346  Swol_2162  putative methyl-accepting chemotaxis sensory transducer  27.61 
 
 
665 aa  176  9.999999999999999e-43  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1435  methyl-accepting chemotaxis sensory transducer  24.9 
 
 
678 aa  169  2e-40  Fervidobacterium nodosum Rt17-B1  Bacteria  decreased coverage  0.00000167242  n/a   
 
 
-
 
NC_011830  Dhaf_3311  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.52 
 
 
695 aa  165  3e-39  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0266885  n/a   
 
 
-
 
NC_008346  Swol_2152  putative methyl-accepting chemotaxis sensory transducer  22.92 
 
 
655 aa  164  6e-39  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.697016  n/a   
 
 
-
 
NC_010001  Cphy_3450  methyl-accepting chemotaxis sensory transducer  27.49 
 
 
664 aa  160  5e-38  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_22560  methyl-accepting chemotaxis sensory transducer  26.13 
 
 
659 aa  157  6e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2600  methyl-accepting chemotaxis sensory transducer  30.83 
 
 
951 aa  156  1e-36  Brachyspira murdochii DSM 12563  Bacteria  normal  0.143462  n/a   
 
 
-
 
NC_011899  Hore_04800  methyl-accepting chemotaxis sensory transducer  25.21 
 
 
658 aa  154  4e-36  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  27.45 
 
 
640 aa  151  4e-35  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  25.73 
 
 
632 aa  151  5e-35  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010424  Daud_0680  methyl-accepting chemotaxis sensory transducer  23.34 
 
 
679 aa  150  8e-35  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4649  methyl-accepting chemotaxis sensory transducer  26.44 
 
 
653 aa  150  1.0000000000000001e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3477  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.87 
 
 
606 aa  148  3e-34  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  31.65 
 
 
549 aa  146  1e-33  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.49 
 
 
610 aa  146  1e-33  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  27.2 
 
 
632 aa  146  1e-33  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0749  methyl-accepting chemotaxis sensory transducer  27.16 
 
 
657 aa  146  1e-33  Thermosipho melanesiensis BI429  Bacteria  normal  0.388814  n/a   
 
 
-
 
NC_011899  Hore_19740  methyl-accepting chemotaxis sensory transducer  26.8 
 
 
667 aa  145  2e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_22390  methyl-accepting chemotaxis sensory transducer  25.16 
 
 
675 aa  145  3e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1181  methyl-accepting chemotaxis sensory transducer  25.12 
 
 
621 aa  144  6e-33  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00022904  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  28.21 
 
 
638 aa  143  9.999999999999999e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_011830  Dhaf_1328  methyl-accepting chemotaxis sensory transducer with Cache sensor  25.4 
 
 
658 aa  142  1.9999999999999998e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2346  methyl-accepting chemotaxis sensory transducer  26.52 
 
 
677 aa  142  3e-32  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0173542 
 
 
-
 
NC_007498  Pcar_0545  methyl-accepting chemotaxis protein (MCP)  26.52 
 
 
676 aa  142  3e-32  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.25556e-16  n/a   
 
 
-
 
NC_011772  BCG9842_B1699  methyl-accepting chemotaxis protein  29.39 
 
 
660 aa  139  2e-31  Bacillus cereus G9842  Bacteria  normal  0.606414  hitchhiker  0.000000000000351139 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  29.5 
 
 
638 aa  139  2e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008752  Aave_1081  methyl-accepting chemotaxis sensory transducer  25.49 
 
 
629 aa  139  2e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.58 
 
 
630 aa  138  3.0000000000000003e-31  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_010184  BcerKBAB4_1871  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.02 
 
 
660 aa  139  3.0000000000000003e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3533  methyl-accepting chemotaxis protein  28.98 
 
 
660 aa  137  5e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2988  methyl-accepting chemotaxis sensory transducer with Cache sensor  24.24 
 
 
684 aa  137  5e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  26.7 
 
 
540 aa  137  7.000000000000001e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0009  methyl-accepting chemotaxis sensory transducer  26.68 
 
 
661 aa  137  9e-31  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK2273  methyl-accepting chemotaxis protein  29.91 
 
 
650 aa  136  9.999999999999999e-31  Bacillus cereus E33L  Bacteria  normal  0.487735  n/a   
 
 
-
 
NC_007103  pE33L466_0016  methyl-accepting chemotaxis protein  29.2 
 
 
660 aa  136  9.999999999999999e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  25.88 
 
 
630 aa  136  9.999999999999999e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  25.2 
 
 
618 aa  136  9.999999999999999e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_011773  BCAH820_0614  methyl-accepting chemotaxis protein  24.63 
 
 
658 aa  135  1.9999999999999998e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010625  Bphy_5569  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.65 
 
 
630 aa  135  1.9999999999999998e-30  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0009  methyl-accepting chemotaxis sensory transducer  26.84 
 
 
661 aa  135  3e-30  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1373  methyl-accepting chemotaxis sensory transducer  27.44 
 
 
571 aa  135  3e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3295  methyl-accepting chemotaxis sensory transducer  26.65 
 
 
720 aa  135  3e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.0000403269  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  25.11 
 
 
639 aa  135  3.9999999999999996e-30  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  27.27 
 
 
629 aa  134  5e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_010483  TRQ2_0922  methyl-accepting chemotaxis sensory transducer  26.45 
 
 
656 aa  134  5e-30  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  25.61 
 
 
646 aa  134  6.999999999999999e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_005957  BT9727_1837  methyl-accepting chemotaxis protein  25.85 
 
 
660 aa  133  9e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  23.75 
 
 
636 aa  133  9e-30  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  27.77 
 
 
629 aa  133  1.0000000000000001e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_3282  methyl-accepting chemotaxis protein  28.82 
 
 
660 aa  133  1.0000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  25.38 
 
 
638 aa  133  1.0000000000000001e-29  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  24.61 
 
 
627 aa  133  1.0000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_005945  BAS3056  methyl-accepting chemotaxis protein  28.6 
 
 
650 aa  133  1.0000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0469  methyl-accepting chemotaxis protein  25.54 
 
 
658 aa  133  1.0000000000000001e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3291  methyl-accepting chemotaxis protein  28.6 
 
 
650 aa  133  1.0000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.279097  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  25.14 
 
 
639 aa  133  1.0000000000000001e-29  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  25.99 
 
 
609 aa  132  2.0000000000000002e-29  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0696  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.18 
 
 
659 aa  132  2.0000000000000002e-29  Petrotoga mobilis SJ95  Bacteria  normal  0.738999  n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  25.74 
 
 
646 aa  132  2.0000000000000002e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_009943  Dole_0205  methyl-accepting chemotaxis sensory transducer  27.23 
 
 
647 aa  132  2.0000000000000002e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0918  methyl-accepting chemotaxis sensory transducer with Cache sensor  23.91 
 
 
657 aa  131  3e-29  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  28.07 
 
 
629 aa  131  3e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_010718  Nther_1887  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.3 
 
 
658 aa  131  3e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.751919 
 
 
-
 
NC_011898  Ccel_2237  methyl-accepting chemotaxis sensory transducer  25.18 
 
 
676 aa  131  4.0000000000000003e-29  Clostridium cellulolyticum H10  Bacteria  normal  0.479493  n/a   
 
 
-
 
NC_005945  BAS0526  methyl-accepting chemotaxis protein  24.16 
 
 
658 aa  131  4.0000000000000003e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  26.12 
 
 
626 aa  131  4.0000000000000003e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0558  methyl-accepting chemotaxis protein  24.16 
 
 
658 aa  131  4.0000000000000003e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  25.84 
 
 
638 aa  131  4.0000000000000003e-29  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4745  methyl-accepting chemotaxis protein  26.19 
 
 
658 aa  131  5.0000000000000004e-29  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0861  methyl-accepting chemotaxis sensory transducer  25.71 
 
 
689 aa  131  5.0000000000000004e-29  Petrotoga mobilis SJ95  Bacteria  normal  0.63678  n/a   
 
 
-
 
NC_013512  Sdel_0631  chemotaxis sensory transducer  27.49 
 
 
656 aa  130  6e-29  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00821954  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  26.85 
 
 
629 aa  130  6e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_011773  BCAH820_2043  methyl-accepting chemotaxis protein  25.49 
 
 
660 aa  130  7.000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000331062 
 
 
-
 
NC_005945  BAS1867  methyl-accepting chemotaxis protein  25.49 
 
 
660 aa  130  7.000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1821  methyl-accepting chemotaxis protein  25.49 
 
 
660 aa  130  7.000000000000001e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2009  methyl-accepting chemotaxis protein  25.49 
 
 
660 aa  130  7.000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  25 
 
 
626 aa  130  8.000000000000001e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
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