| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0484 |
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| Symbol | |
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| ID | 2741389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 539786 |
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| End bp | 541906 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637159356 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_971098 |
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| Protein GI | 42526000 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00175726 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGGTG AAAAAAATTA TCGGAAGGAG GGAAGACGGT TTTCTATTTT AAGAAAATTG
GTTTTCTTTT TTGGTATGTT AATCCTGATA GGAGGATTTA CAATGGGAGC CTCTGCTTTA
TTTGTAGCAA AAAAGGCCTT ATTGGGAAAA ATTGAAGAAG CTCTACTAAT GAAGGCAGAG
GATACGGCCG AAATTGTCGA CAGCAGGGCG AATTCCATGT TATATTTTTT GGAAGGTCTT
GCGCGCATTC CGGCACTGCG TGATTCCAAA CTCAGTTTTT ATGAAAAAGT AAAGGCATTA
CAAAAAGACG CAGAGCGGAA TAAAACGATA GAATACTTTG GAATTTCCGA TATAAACGGG
ATAAGATATT CTGCTGATGG ATATTCCATT TTTGTCGGTG ATAGGGAATG GTATAAGGAG
GCTATTAAAG GCAAGAATTT TATTTCCGAA CCGATTATAA GCCGTACAAC GGGTGAACTG
CAAATTATAT TTTCCGTGCC TATTTATGAT GATGAACACA ATATTTTGGG CGTATTTAGC
GCCGGCGTTA ACGGTTTGGC CCTTAACGAT CTAATCGACG ACATCGTAAT AGGAGAAACG
GGCGGCTGTT ATATTATCGA TGCTTCAGGG ACAACGATTG CCGATAAGGA TATAGAATTG
GTTAAGAGAC AAGAGAACAG CATTAAAAAG GCTATATCCG ACCCTGAACT TAAAAGCATT
GCCGATTTTG AACAAAAAGT CTTAGCATCT TCTGAAGCAG GTTTAGCCAG ATTTGCATAT
GAAGGACAAC AAGAAATAGC CGCTTATTCT CCTATGAAAA CTAAAAACTG GAAAGTCATA
ATCAGTGCTC CCGTTAATGA ACTTACCGGC AGCCTCCGGC CCTTAAAAAT TACAATCAGA
ATTATAGGTG TTACCATATT GATTATATCC ATTATACTTA CGGCTATTAT CGCCCTTACA
ATAGTAAAGC CCATTACATC AACGGTTCAA GCGCTTAAAA ATATTGCAGA TGGGGACGGA
GATTTAAGGG TGCGCTTACC AATCAAAAGA AATGATGAAA TAACCGATTT ATCAAAATAC
TTTAACAAAA CAATTGAAAA AATAGGAAAC TCAATCAAAA CGGTAGGTTC CGAAACTCAG
GAAATGAAAC AGATAGGAAA TGAGCTTGCA AGTAATATGA CGGAAACGGC AAGCGCCATC
CATCAAATAA GTACAAACAT AGAAGGAGTA AAACAACAAG CCCTTACACA AGCGGCGAGC
GTTACCGAAA CCTCAGCGAC TATTGAACAG ATTATTAAAA CTATCGCACA ATTAAACGGC
ATGATAGAAT CTCAAGCTGC CAATGTAGCC GAATCTTCAT CGGCAATAGA GCAAATGGTA
GGAAACATAA GCTCCATAAC TCAGACTCTT GCAAGAACGG ATGACGCAAT CAAAAATCTT
GCAGGAGCTA CAGCTGAAGG AAAAGAAACA CTTTCTCTAT CAAATACCGT AACTCAAAAA
ATTTCGGAGG AGTCGGGCGG CCTCTTAGAA GCTTCAAGCG TTATCCAGCA TATTGCAAGT
CAAACAAACC TCCTTGCCAT GAATGCAGCG ATTGAAGCAG CTCATGCCGG CGAAGCAGGG
AAAGGCTTTG CCGTCGTTGC CGATGAAATT AGAAAGCTCG CAGAAGAATC AAGTTCACAG
GGAAAAACAA TAACTTCAAC CTTAAAGGTT TTAAGCAAAG AAATTGAAAA TCTTTCATCT
TCTTCAAAAT TGGCTGAAGA AAAATTTGAC AGCATCTTCG CTTTATCGGA GCAGGTAAAA
AAGATGAGTG AGTCTCTTAT GCTTGCAATG AAAGAACAAG AAAACGGCGG CCGTGAAGTT
TTGACGGCAA TTCATAATAT CAATTTAATA ACTTCTCAGG TAAATGACGG TTCTGCCGAA
ATGCTTGCGG GAGGAAAAAA CATTGCCGTT GAAATGCAAA AACTTGATGA CCTTACAAGA
GTTATCACTG CAAGCATGAA TGAAATGGCA GCGGGTGCAT TCCAAATAAA TGAAGCGACT
CAAGAAGTCA ATATTATTTC GCAAAAAAAT AAAGAAAATA TCGGCAATCT CGTAAACGAG
GTTGAAAGAT TTAAAGTCTA A
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| Protein sequence | MVGEKNYRKE GRRFSILRKL VFFFGMLILI GGFTMGASAL FVAKKALLGK IEEALLMKAE
DTAEIVDSRA NSMLYFLEGL ARIPALRDSK LSFYEKVKAL QKDAERNKTI EYFGISDING
IRYSADGYSI FVGDREWYKE AIKGKNFISE PIISRTTGEL QIIFSVPIYD DEHNILGVFS
AGVNGLALND LIDDIVIGET GGCYIIDASG TTIADKDIEL VKRQENSIKK AISDPELKSI
ADFEQKVLAS SEAGLARFAY EGQQEIAAYS PMKTKNWKVI ISAPVNELTG SLRPLKITIR
IIGVTILIIS IILTAIIALT IVKPITSTVQ ALKNIADGDG DLRVRLPIKR NDEITDLSKY
FNKTIEKIGN SIKTVGSETQ EMKQIGNELA SNMTETASAI HQISTNIEGV KQQALTQAAS
VTETSATIEQ IIKTIAQLNG MIESQAANVA ESSSAIEQMV GNISSITQTL ARTDDAIKNL
AGATAEGKET LSLSNTVTQK ISEESGGLLE ASSVIQHIAS QTNLLAMNAA IEAAHAGEAG
KGFAVVADEI RKLAEESSSQ GKTITSTLKV LSKEIENLSS SSKLAEEKFD SIFALSEQVK
KMSESLMLAM KEQENGGREV LTAIHNINLI TSQVNDGSAE MLAGGKNIAV EMQKLDDLTR
VITASMNEMA AGAFQINEAT QEVNIISQKN KENIGNLVNE VERFKV
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