Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4543 |
Symbol | |
ID | 7261572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4834651 |
End bp | 4836642 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643564460 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_002460980 |
Protein GI | 219670545 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.113755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGAAAA GTATCAGAAC ACAACTGGTC ATTTATTTTT CCATACTTGT ATTGCTATCA TCTTTAGCCC TGGGATATCT GTCTTTAGCC AAGGCCAGCA ATGCCCTGAC GGCTGAAGCA GAAAAAGCGT TAGGCACCCT TGCCGCCGAC TCGGCTAAAC TCACGGAAAG CCGCTTGGAA ACCCAAAAGA AAACCTTGGA GATGATCGCC TTAAGGGAAG ATATGCAAAC CATGGATTGG CAGGTACAAC AACCCATCTT GCAAAGACAA CTCCCCAACA CCAATTTTCT TGATCTTGGG GTCGTTCAGC TGGACGGTTC CGTCAGCTAT TCCGATGGGT CAACCAACCA ACTGGGAGAC CGGGACTATG TGCAAAAGGC CTTAAAAGGG GAAACCAATG TATCCGACCT GATCATCAGC AGGGTGACCA ACAGCCTGGT TATTATGTAT GCCACACCGA TTGTCAACGA AGGGAAAGTG GTGGGGGCAT TGATCGGGCG CCGTGACGGC AATGCTTTAA GCCTGATCGC GGAAGACACA GGATATGGTC AAAATGGTTA TGGATATATG GTTAATAGCC AGGGAACGGT TATTGCCCAC CCGGACAGGG AAAAAGTGTT CGCTCAATTC AATCCTATCG AAGCAGTCAA AGAGGACCAA AGTTTAATGT CCACGGCGAC GATGATTGAA AACCTGCTGC AGAGCGGTCA GGGAGTCAGC TCCTATACTT ATAACGGTCA GGACTTATAT GCGGGATATG CTCCTATTCA GGGCAGCGAT TGGACCTTCG TTATTACGGC CAGTCAGGAA GAAGTTCTGT CAGCCATCCC TGCTCTCCAA AAGGATATTT TAGTTACCGG AGTGATTATT TTTTTCATAG CTATGGGCTT TGTCACCCTG ATTGGAAATT CTCTGGCTAA GCCGATTATG AAAGTGACGG AGAGTGCCGA GAGAATTGCC CGCTTGGATG TGACCCAGGA TGTACCTGAA GGGTTGCTCA AAAAAGCCAA TGAGATCGGA GCCTTGGCCA AAGGAATCCA AGTCATCACC GCCAGCCTGA GAGAGTTTAT AGGGGACGTC AAAGAGTCCT CTGAGAAAGT CGCCGCTGTG TCTGTGCAGC TGACAGCGTC AACCCAGCAA AGTGCCATCA CTGCGGAAGA AGTATCGAGA GCAGTTACGG AAATTGCCAG AGGAGCATCC GAGCAAGCCG GCAATACGGA AGAGGGAGCG CTGAAAGCCG TCCGTCTCGG ACAAGCCATT GAGAAAGATC TTGAGTTGGT GGAAGCCTTA AATGTGGCAT CGAATAGGGT TTCCGCTGTT GTGGAGGAAG GCCTGCAAGA GATCGATAAC CTCACCCGTA TCTCTCAGGA AAACAACGGA GCCACTGAGG AAATCCGTCA AGTAATTTTT AAAACCAATG AAAGTTCCCA AAAGATTGAG CAAGCCAGCA ATGTCATTGC TTCCATAGCA GAACAGACCA ATCTCCTGGC CTTGAACGCA GCTATCGAAG CAGCCCGGGC AGGGGAAGCC GGACGGGGAT TTTCCGTGGT GGCCGAAGAG ATTCGCAAGC TGGCTGAGCA ATCTTCCGCT TCCACTAAAT CGATTGATCT CATGGTGAAG GAGCTGCAAA ATAACTCTCA GGATGCGGTC AAAAACATGG AGAGAGTATC CCAGATATCC AAGGAACAAG CGGAAAGCGT TATGACCTGC CAGGATAAAT ATCGGGTGAT TGCCCAATCC ATGGAGGAAG CTATCCAAGC CGTGAACGAG CTGAATGTTT CGGAAGCGGC AATGGACAAA ATTAAGGATG AAATCCATTC CACATTACAA GCTCTCTCGG CCATCGCTGA AGAGAATTCC GCCGCCACAG AGGAAGTTAC CGCTTCCATG GAAGAGCAAA CAGCATCTGT CCAGGAAATC GCGGCTTCCA GTGAAGGGCT GTCAGAATTA GCCCAAAGCC TTAAAACGGT CATCATGAAA TTTAAACTAT AA
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Protein sequence | MLKSIRTQLV IYFSILVLLS SLALGYLSLA KASNALTAEA EKALGTLAAD SAKLTESRLE TQKKTLEMIA LREDMQTMDW QVQQPILQRQ LPNTNFLDLG VVQLDGSVSY SDGSTNQLGD RDYVQKALKG ETNVSDLIIS RVTNSLVIMY ATPIVNEGKV VGALIGRRDG NALSLIAEDT GYGQNGYGYM VNSQGTVIAH PDREKVFAQF NPIEAVKEDQ SLMSTATMIE NLLQSGQGVS SYTYNGQDLY AGYAPIQGSD WTFVITASQE EVLSAIPALQ KDILVTGVII FFIAMGFVTL IGNSLAKPIM KVTESAERIA RLDVTQDVPE GLLKKANEIG ALAKGIQVIT ASLREFIGDV KESSEKVAAV SVQLTASTQQ SAITAEEVSR AVTEIARGAS EQAGNTEEGA LKAVRLGQAI EKDLELVEAL NVASNRVSAV VEEGLQEIDN LTRISQENNG ATEEIRQVIF KTNESSQKIE QASNVIASIA EQTNLLALNA AIEAARAGEA GRGFSVVAEE IRKLAEQSSA STKSIDLMVK ELQNNSQDAV KNMERVSQIS KEQAESVMTC QDKYRVIAQS MEEAIQAVNE LNVSEAAMDK IKDEIHSTLQ ALSAIAEENS AATEEVTASM EEQTASVQEI AASSEGLSEL AQSLKTVIMK FKL
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