Gene Hore_19740 details

Gene Information

• Locus tag: Hore_19740
• ID: 7312789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: -
• Start bp: 2121164
• End bp: 2123167
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643612420
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_002509716
• Protein GI: 220932808
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 60
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGTA AAAAGAAGAC CAATTTTAGG TTGAGAAGTA GTTTAACAAT AAAAGTTATC 
GGGGTTGTCT TTCTTGTAGT AGTAATTTTG GTTCTGTTTT TTGGAGTTAC CATTAATTCT 
CTTGTATCAG AAGAGATTAC TTCACTAGTT CAGGAAAGGA ACTTTGGTAT GGCATGTTCC 
ATCCAGAGTG AAGTAGATGC TTTTATTAAG GAAACAGTTA ATATGTTTGA GTTAACTTCA 
AAACAGGATA TAGTCAGGGC AGGCAGCAGG TTTCCAATGA TGGATTTATT TAATAAAATT 
ACAGCTGACT ATCCACAGTT TGTCTCTATG TACTTTGCTT CTGTTAAAGG GGAAATCATA 
CATTTCCCGG TAGTTGAATT CTCACCGGAT TATGATCCAG TTCAGGAGGA ATGGTACAAA 
AAGGCAGTAA CTACAGAAGG TCTGGTAATA GGTAACCTGA AAAAAAATAA GAACGATGGT 
TATCCGGTGA TTACGCTATC AAAGTCAATC AATGGGTTTG ACGGTAAGTT GAGCGGGGTT 
CTGGGCGCAA CAATATCTTT AAAAAAATTT TCAACCCTTG TCAGTGATAT GTTGAATGAA 
GACAATGTCT TATCATTTAT GGTTGATAGC AAAGGAAAGT TAATTGCCCA CTATGACCAT 
GATATGGTAA TTGAAGGTAA GGACTTTGCA CAGGTAATTA ACATTGATAA CATAAATAAA 
ACAAGGGCCG ATAACCTTCA ATATACCTTT AACCAGACCG AGTATCTGGG ATCATATGTT 
CCACTTCCTT TTATTGATGG TACTATTATT GTATCGGTGC CCGTAAAACA AGTATTTTCT 
GGATTGAACA GGATTCAAAG GAAAATGGTG ATAATTGAAT TAACTATTCT CTTTATTTTA 
GTTCTGGCAG TATACATTGT AATAAGAAGA TATCTACTGC AACCCATTTC TTTTTTCACA 
AATAACATCC AGAGGGTTGC CCGGGGTGAT TTAACGGTTA AATTTGATCT TAAACGGTCA 
GATGAGATTG GACAGTTAAC AAAGGTATTT AACAGTATGG TAACACAGTT GAAAAAAATT 
ATTATATCCA TTAAAGATGC AGCTAAAATG GTAGGTGGTT CCTCACACAA CCTGAAAGAT 
AATTCCCTAC AGGTAGGTAA TATGACAGAC CAGGTGTTGT CATCAATTGA AGAGCTGGTA 
TCCGGCTCAG ACGAACAGGC CAACAATATT GAAGATGTAA ATAAGCAAAT TCAGAACCTG 
GCTGAGGAGC TGAGCCTTGT TAATGAGTCA AACCAGATGG TCAGAAAGCT TGCAGGCAGT 
ATGAACCTTG CTTCAGACAG GGGAAGCAAG GAAATTAAGA GGGTAAAAGA ACAGATGGAT 
AAGATAAAAG ATACTATTCA TAAAGCTGCC CGTGGTTTTA CTTACCTGGA ATCTGCATCG 
GAAGAAATAG ATGATATTTT AAATTTAATA AATAATATAG CAGAACAGAC AAACTTGCTG 
GCATTAAATG CTGCCATTGA GGCTGCAAGG GCAGGAGATG CAGGCCGTGG TTTTAGCGTA 
GTTGCTGAAG AAATACGGGA ACTTGCAGTC GAATCGGTAA AATCAGCAGA CAGGATACGT 
GATTTAATAA CCGATATTAA ACAGGAAACA AAGGCAGCAA GTAAGAGAAT GCAGGAAGGC 
ACAGAAGAAG TAAATAAAGG GGAGGCAGTT GTTAATTCTG CCCGCGAGGC TTTTGGTGAT 
ATAAGTCAAC TAGTTAAAAA TGTAAACAAT GGATTTGAAA AGTCTAATGA GGCTCTAATG 
AAAGCAAACA ATAATAGTAA AAGGATAGTA GAAAATGTTC AAAATATAGC AGGTATATCT 
GAAGAGATAT CAGCAAGCTC ACAGGAAGTA GCAGCAGCAA GTGAAGAGCA AAAGAGTTCA 
ATTGATAATA TAATTTCACT GGCAGATGAA CTGGCCAGCA TGGCAGAAAA CTTAAACAAA 
TCAATTGATC GATTTAACAT TTAG 

 

Protein sequence

MKSKKKTNFR LRSSLTIKVI GVVFLVVVIL VLFFGVTINS LVSEEITSLV QERNFGMACS 
IQSEVDAFIK ETVNMFELTS KQDIVRAGSR FPMMDLFNKI TADYPQFVSM YFASVKGEII 
HFPVVEFSPD YDPVQEEWYK KAVTTEGLVI GNLKKNKNDG YPVITLSKSI NGFDGKLSGV 
LGATISLKKF STLVSDMLNE DNVLSFMVDS KGKLIAHYDH DMVIEGKDFA QVINIDNINK 
TRADNLQYTF NQTEYLGSYV PLPFIDGTII VSVPVKQVFS GLNRIQRKMV IIELTILFIL 
VLAVYIVIRR YLLQPISFFT NNIQRVARGD LTVKFDLKRS DEIGQLTKVF NSMVTQLKKI 
IISIKDAAKM VGGSSHNLKD NSLQVGNMTD QVLSSIEELV SGSDEQANNI EDVNKQIQNL 
AEELSLVNES NQMVRKLAGS MNLASDRGSK EIKRVKEQMD KIKDTIHKAA RGFTYLESAS 
EEIDDILNLI NNIAEQTNLL ALNAAIEAAR AGDAGRGFSV VAEEIRELAV ESVKSADRIR 
DLITDIKQET KAASKRMQEG TEEVNKGEAV VNSAREAFGD ISQLVKNVNN GFEKSNEALM 
KANNNSKRIV ENVQNIAGIS EEISASSQEV AAASEEQKSS IDNIISLADE LASMAENLNK 
SIDRFNI