Gene Dole_0205 details

Gene Information

• Locus tag: Dole_0205
• ID: 5693022
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 227044
• End bp: 228987
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 641262784
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001528092
• Protein GI: 158520222
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTTG GTTTTATAAC AAAAAGCTAT CGAAACCGGG TGATGGCGCT GACGCTGCCC 
GTGGTGGTGG GCGCCGTGGT GCTGGTGACC ATTCTTGCTT ATATCTTTAT TCTTTCCAAC 
ATGGTCAATT TTCAGCGGGA GAACATGGAG ACCGCCCTGG TCGGCATGGC GGACGGTCTG 
GACACCCGCA TCAGCGAAGC CCGGAACGCC ATCTCCGTGT TAAGCAGCCG CCCGGTTCAC 
AGGTCCGACG GTGCGGCCGT GCTGGAGCTG GCCCATGCCG CGGCCCCCAC CTTTTTCGCC 
CTTTTTCTGT CCGACCCCGG CGGCGGCCTG GCGATGGCGG TCGGAGAAGC CATTCCCGAG 
CAGGTGGTGC TGCCGCCGTT TGAAACCTTT GACATGGCGC CTGGCCCGGA CGGTCGCCGG 
TCCGTGTTTG TCGGGTCGGT GGAACGCATT CCGCCCAGCA TGACCCCGGT TTTTCTGGTG 
GCGGCCCCGG TCCGCCTGGT GGACCCGTCA GGCGGGGAAG CCGACGGCGT GGTGGGCGGC 
TACGTGGATA TCAACCGGTT GTTTGATTCC TGCGTGGCTT CCTTTGTACC GCTGCGCACC 
AGTCATGTGT TTCTGGCCGA TGCCGCGGGC AAGACCCTGG CCCGTTCGGG CGAAGACGTG 
GCCACAGCGG TTTTTCTGGC CAAAAAAACC GGCGTAAAAG AGAGTGAGTC CCTGTTTCAC 
AAGAATGCCG CCGGCACCCG TTACCTGTCG GTGGTGCGGC CCTGCCTTGA CGGCTGGTGG 
GTGGTGGGCC TCTCCGTGCC GTTAAAGGCG CTGTTCACGG ATCTGCCCCG GCTGATTTTC 
TATTCGGTGC TGCTGGGCCT GGCCACCATT TTTCTGGTCT CTCTCATGGC CTGGGTGATC 
ACCGGCATGA TGGTGAAAAC GATCAACCGC CTTACCGACA ACCTGAAAAA TATTGTAGAG 
GGCAAGGGGG ACCTGACCCA GCGGCTGACG GTAAAGGGGG AGGATGAAAT CGCCGGCCTG 
GCCATGTGGT TCAACCGGTT CGTGGAAAAG CTGGGCCGAA TGATCACCAC CATTACCAAA 
AAGGCGACCC GGGTGGGCGA GGCGGCCCGT GCGCTGCAGG AGTTTTCCGG TGAAATGACC 
CATACCGCGG GGTCGCTGAA AGACCTGTCA AAAATTGTGG TGGCCTCCAC CGACGACGTG 
AACATAAATA TGGCCTCTGT GGCCACCACC ATGGAGCAGT ACTCCCACAA TCTGGACACC 
ATGGCCTCGG CCACGGAGCA GATGACCGCC ACCATCGACC AGATCGCCCA GAGTTCCGGG 
GTCTCCATGA AACGCACCAA CCAGGCGGTG TCGTACACCC AGACGGTGCA TGAAAGCGTG 
AAAGACCTGG GTGATGCCAT GGAGGCCATC GGCGGTATCA CCGATGCCAT TGCCCGTATA 
TCCGGCCAGA CCAACCTGCT GGCGCTCAAT GCCACCATCG AGGCGGCCCG GGCCGGGGAA 
CAGGGCAAGG GGTTTGCCGT GGTGGCCGGG GAGATCAAGA CCCTGGCAGG AGAAACCGAC 
ACGGCCACGA AAAGCATTCA CGACCGGGTG TGCGGCATTC AGACCTCCTC CCGGTCCACC 
ATCGATTCCA TTGACAAGAT TGCGGACATC ATTCGGGCCA TTGACGAGGT TGTATCCAAC 
ACGGCCACGG CCCTGGAGCA GCAGTCCACC TCCACCCGGG AAATCGCCGC CAACATCATG 
CAGGCATCAG AGGGCATTCA GGACGTTCAC CGGCGGATCT CCCAGAGCAC GGCCGGGCTG 
AGCGGAATGG CCAGGGAGAT CAAGACCCTG GACGACCGGT CAAAGATCAT TTTTCAAAAA 
AGCGGAGACA TCGATCGCCG GGCCGCTGAA CTGGCCGCCA TTGCCGAAGA ACTTACCACC 
ATGGTGAGCC AGTACAAGGT ATGA 

 

Protein sequence

MALGFITKSY RNRVMALTLP VVVGAVVLVT ILAYIFILSN MVNFQRENME TALVGMADGL 
DTRISEARNA ISVLSSRPVH RSDGAAVLEL AHAAAPTFFA LFLSDPGGGL AMAVGEAIPE 
QVVLPPFETF DMAPGPDGRR SVFVGSVERI PPSMTPVFLV AAPVRLVDPS GGEADGVVGG 
YVDINRLFDS CVASFVPLRT SHVFLADAAG KTLARSGEDV ATAVFLAKKT GVKESESLFH 
KNAAGTRYLS VVRPCLDGWW VVGLSVPLKA LFTDLPRLIF YSVLLGLATI FLVSLMAWVI 
TGMMVKTINR LTDNLKNIVE GKGDLTQRLT VKGEDEIAGL AMWFNRFVEK LGRMITTITK 
KATRVGEAAR ALQEFSGEMT HTAGSLKDLS KIVVASTDDV NINMASVATT MEQYSHNLDT 
MASATEQMTA TIDQIAQSSG VSMKRTNQAV SYTQTVHESV KDLGDAMEAI GGITDAIARI 
SGQTNLLALN ATIEAARAGE QGKGFAVVAG EIKTLAGETD TATKSIHDRV CGIQTSSRST 
IDSIDKIADI IRAIDEVVSN TATALEQQST STREIAANIM QASEGIQDVH RRISQSTAGL 
SGMAREIKTL DDRSKIIFQK SGDIDRRAAE LAAIAEELTT MVSQYKV