Gene Cphy_3450 details

Gene Information

• Locus tag: Cphy_3450
• ID: 5743562
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 4243489
• End bp: 4245483
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 641294563
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001560542
• Protein GI: 160881574
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAGCC AAAGCATTAA AACAAGACTT ATTATACAAT TTACTGTTTT AATTTTGTTA 
GCCCTAATCA CTTCTGGAAT TATTACCATA AATATAGCGA GTAATATTAT AATTGAGGAA 
GCGAAAACTA CGTTAGAAGC TTTAGCTTTA GATGCTGCTA AATTGGAAAG TAGTCGATTG 
GAATCACAGA GAAAAATTCT AGATACAATT TCAGTAATGG AAGAAATGGA AAGTATGGAT 
TTGCTTCAAC AGCAGCGACT TTTAAAACGA ATGGTTGACG AGACAGGTTT TATAGAGCTT 
GGAATATTAT CACAGGATGG GACAATTGTT TATTCGCAAG GAAACAGTAT TAAAATCGAG 
GATACTCATC CAGTGAGAAA TGCATTGAAT TCAAATGGAC ATGCGATTTC TTTCGGAATA 
AGTGTTGCTA CAGGTGAAAT TACCCTAATA CAAGCAGTTT CGATAGAGAA TAATGGGGAG 
GTATTAGGCG CACTGGTCGG ACGTATGGAC GGAAATTCTT TGAGTTTACT TGCTGCGGAT 
ATTGGCTATG GAGAGGAAGG GTATTCCTAT ATCGTGGATA GTAAAGGTAC TGTAATAGGT 
CATAAAAATC AAGACTATGT CATGAACCAG TTCTCACCAA TTGAAGAAGC GAAAACTGAT 
GATAATTATA AATCTTTAGC TAAATCTTTT GAGAAGATAT TATCTCAGGA CAAAGGAACC 
AGTAATTATC AATTTAATGG AGGAGATCAA TTTATTGGCT TTGCTAATGT TCCTGGAACT 
GACTGGACCT TTGTTATTGT AGCTAGTAGA GCAGAAATCT TAAGTTCGGT ATCAGTACTG 
CAAAGATCGA TAATTATAGT GGTTACAATA GTGCTTCTAA TAGGGATTAT ATTAACCTAT 
AGTATTGGAA GTTCTTTAAC AAAACCAATT ATCAACACAA TTGAACACTC AAAAAAGATA 
GCGAGTCTTG ATTTGAGATC TAATTTGGAT CAGAAATACT TAAAGAAAAA AGATGAAATT 
GGTGAACTTG CAAGATCGCT TCAAAATATT ATTCATTCAC TTCGAACAAT ACTAATGGAG 
ATACATAGTT CTTCAGAGCA ATTAAGTTCC TCATCGGAAG AGCTTACTGC CACCACCCAG 
CAAGCATCTT CTGCAGCTTG TGAAATTGCG AAAACGATAG AAGAAATTGC GGATGGAGCT 
TCCGAACAAG CAAAAAGTAC GGAGGTTGGT ACAAGCAAAG CCCAATCCTT AGGAAGAACA 
ATAGAACTAG TAAAAGGCGA TATTGATAAG GTGAAGGATT CTTCAAGGCA GGTATCAAAT 
GTCGTAACAG AAGGGCTAGA AGATATTGCT TTACTTAGTA AAATAACAGA TGAAAGTACA 
GTAGCAGTAC ATGATATTTA CGAAGTAATT ATGGAGATGA ATGAGAGTTC AAATAAAATT 
GGCGAAGCAA GTGGTGTGAT AGAATCGATT GCTGCTCAAA CTAATTTACT TTCTTTAAAT 
GCGGCGATTG AAGCTGCAAG AGTCGGAGAG GCTGGTAAGG GATTCGCGGT TGTTGCAGAG 
GAAATAAGAA AACTTGCAGA ACAATCCTCA AAATCAACGA AGTTAATTAA TGAGATCGTG 
AGTGAATTAC AGCATAATAC GGAGAATGCT GTTACCACGA TAAAACGTGT CTCAGTCATC 
TCAAACGAGC AGGCAAATAG TGTGGTTAGT AATAATCAGA AGTATGAAAT TATTGCAAAG 
ACTATGACTA ATTCTATGGA TGCTATTAAG CAGTTAGATA GGTCAGGTGA TGATATGGAT 
GTTATGAGAA AGGCTATTAT TGAAGAATTC GAGAGTCTAT CAGCGGTTGC TGAAGAAAAT 
GCTGCTGCAA GCGAAGAGGT CTCTGCTTCG ACCGAAGAAC AAACCGCTTC CATCGAGGAA 
ATATCGAATG CTAGCGATTA TCTATCTGAG TTAGCATCCA AGTTAAATTC TTTAGTTACT 
GAGTTTAAAT TATAA 

 

Protein sequence

MKSQSIKTRL IIQFTVLILL ALITSGIITI NIASNIIIEE AKTTLEALAL DAAKLESSRL 
ESQRKILDTI SVMEEMESMD LLQQQRLLKR MVDETGFIEL GILSQDGTIV YSQGNSIKIE 
DTHPVRNALN SNGHAISFGI SVATGEITLI QAVSIENNGE VLGALVGRMD GNSLSLLAAD 
IGYGEEGYSY IVDSKGTVIG HKNQDYVMNQ FSPIEEAKTD DNYKSLAKSF EKILSQDKGT 
SNYQFNGGDQ FIGFANVPGT DWTFVIVASR AEILSSVSVL QRSIIIVVTI VLLIGIILTY 
SIGSSLTKPI INTIEHSKKI ASLDLRSNLD QKYLKKKDEI GELARSLQNI IHSLRTILME 
IHSSSEQLSS SSEELTATTQ QASSAACEIA KTIEEIADGA SEQAKSTEVG TSKAQSLGRT 
IELVKGDIDK VKDSSRQVSN VVTEGLEDIA LLSKITDEST VAVHDIYEVI MEMNESSNKI 
GEASGVIESI AAQTNLLSLN AAIEAARVGE AGKGFAVVAE EIRKLAEQSS KSTKLINEIV 
SELQHNTENA VTTIKRVSVI SNEQANSVVS NNQKYEIIAK TMTNSMDAIK QLDRSGDDMD 
VMRKAIIEEF ESLSAVAEEN AAASEEVSAS TEEQTASIEE ISNASDYLSE LASKLNSLVT 
EFKL