Gene Dhaf_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1328 
Symbol 
ID7258298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1436620 
End bp1438596 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content48% 
IMG OID643561240 
Productmethyl-accepting chemotaxis sensory transducer with Cache sensor 
Protein accessionYP_002457820 
Protein GI219667385 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTCT CGATTAGACA AAAGATAACG GCAGTCATAC TTTTTGCAGC CCTGATCCCG 
ACAGCGCTGC TGGGGTTCTT TAGCTACAAG GGAGCGAGTA ATGCGCTGGA AAATGAGCTT
AAGAATACAG CAGAACAATC GATGCAACGT ATACAAGATT CCACGACATT GTATCTTGAA
GGATATGAAC AAAATCTAAA GCGGCTGGGA ATGGAAGATC GTATTCTGAT TGCCGCCCTG
CAGGGGGAAA GTGAGGAGGC TTTGCAGAGC TTCCAAATTT ATAAAGAGAG CAACCCTGAC
ATCTTGAATA TTTATTTAGG AACAAAGAGT GGGGAGATGA TTGTGTACCC CGCGGCAGAG
TTGCCTCCGG GTTTTGATCC AACGGCTACG GATTGGTACC GGCAGGCGGC AGGCAGCGGG
CAGATTATTT GGACCGAACC CTATGTGGAT ACAGCGACAA AAAGGTTAGT GGTGTCAGCG
GCCAGACCTG TCCTGGACCC ATCCACAAAG GAATTAACCG GGGTGGTGGG CGTTGATATT
GCCCTCGATA CTTTAAGTGC TTTAGTTGGG GATATGAAGA TTGGCCGTCA GGGCTATATC
TTCCTTTTGG ATCAAAGCGG CAAAATTATG ACGCATCCTG ACCCTGCCTT GATTGGGGAA
GAGATCCCTG TGGAAGAACT TAAGAAGGCC GTGGCTCAGG AACAAGGAAT TGTCGATTAT
ACATATGGTG GAGAAGAGCA ATTCAGTGTC ATTGCGGCCT ATCCCAAGAC CCAGTGGAAG
TTCGTTGGCG TATTAGGATA TAACGAGATC AATAAAGCGG TCTCCCAAAT CCTCAGAAAT
ACTTTGACCT ATTGTGTAAT TTTTGCCGCG TTAGCTATAG TTTTTGGAAT ACTTGCCACC
CGTGGCTTCA CTAAAGCCCT TAAAGCCTTG TTTGCCTATA GCGAGAAAAT TGGTTCCGGG
GATTTTACAG TTCGGGCCAG GGCCTTGTCC CGGGATGAAA CCGGTGCATT GACCAACACC
TTAAATCAAA TGGTCATTCA GTTGGCGGGT CTGATCGGAA ATATTAAGCA TGTTGCTGAA
GAGATGAATA CCTCTGCCGA AAAGTTGGCA GCCAGTGCCG AGGAGACGAT GGCCTCCAGT
GAAGAGATTA ATGCCACAGC AGCTCAGATT GCCGGCGGTG CTTCCGACCA AGCGGCTCAG
GCGGAAAAAG GTACTCGAAT GGTTACGGAA CTTGCCACAA AAATCCAAAC CCTCGGGGCG
AACTCGGTGG AAATGGTTAA CTCCTCCATG GATGCTAAAC AGGCCAATGA GCGGGGGCTG
CAGTCGGTTG AGCATTTGCG TGTAAAAACG GAAGACAGCA GCTTAGCTGT TGATCAGATC
AGTGAAGTGA TCCGTAATCT TGATGGTAAA TCCCAAGCTA TTGGCAGTAT TCTTGCTGCA
ATTACAAATA TTGCAGAGCA AACCAATCTC TTGGCTTTAA ATGCTTCCAT TGAAGCTGCC
CGGGCCGGAG AGGCCGGTCG GGGATTCTCC GTGGTGGCGG ATGAGATCCG TAAGCTTGCT
GAGCAATCTG CTCAATCGGT CCAAGGTATT GAAGGGATTG TGGAAGATAT TCAAAGGGAG
AGCTATCATG CGGTGGGTGT GATGAAAGAA GTGAAGAATC ACTCCCAAGC CACTGTGCAA
TCTGTGGCGG ATGTCAGCCA ATCCTTTGCT GAGATATCTC AAGCCATGGC TGCAATTAGA
GAAAAAATTG CGCATACTAC GGCTTTGATT CAAGAAATGA CCATGGATTC GAATCAAGTC
GTGGACGTGA TTCAGAATAT CTCCGCAGTA ACCGAGGAAA CCGCTGCCGC ATCAGAAGAA
GTGAGTGCAT CCATGGAGCA AACAGCCAGT GCTTTTAGCA ATGTAGTCAA AACGGCAGAA
GAACTTGAAC AGCTGGCCGG AAAATTAAGT CTGGAAATTG CTCAGTTCAA AATTTAA
 
Protein sequence
MVFSIRQKIT AVILFAALIP TALLGFFSYK GASNALENEL KNTAEQSMQR IQDSTTLYLE 
GYEQNLKRLG MEDRILIAAL QGESEEALQS FQIYKESNPD ILNIYLGTKS GEMIVYPAAE
LPPGFDPTAT DWYRQAAGSG QIIWTEPYVD TATKRLVVSA ARPVLDPSTK ELTGVVGVDI
ALDTLSALVG DMKIGRQGYI FLLDQSGKIM THPDPALIGE EIPVEELKKA VAQEQGIVDY
TYGGEEQFSV IAAYPKTQWK FVGVLGYNEI NKAVSQILRN TLTYCVIFAA LAIVFGILAT
RGFTKALKAL FAYSEKIGSG DFTVRARALS RDETGALTNT LNQMVIQLAG LIGNIKHVAE
EMNTSAEKLA ASAEETMASS EEINATAAQI AGGASDQAAQ AEKGTRMVTE LATKIQTLGA
NSVEMVNSSM DAKQANERGL QSVEHLRVKT EDSSLAVDQI SEVIRNLDGK SQAIGSILAA
ITNIAEQTNL LALNASIEAA RAGEAGRGFS VVADEIRKLA EQSAQSVQGI EGIVEDIQRE
SYHAVGVMKE VKNHSQATVQ SVADVSQSFA EISQAMAAIR EKIAHTTALI QEMTMDSNQV
VDVIQNISAV TEETAAASEE VSASMEQTAS AFSNVVKTAE ELEQLAGKLS LEIAQFKI