More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_3161 on replicon NC_011369
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011369  Rleg2_3161  binding-protein-dependent transport systems inner membrane component  100 
 
 
259 aa  491  9.999999999999999e-139  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4607  binding-protein-dependent transport systems inner membrane component  85.33 
 
 
259 aa  425  1e-118  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_1479  ABC transporter, permease protein  44.72 
 
 
260 aa  236  2e-61  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0195961  n/a   
 
 
-
 
NC_007802  Jann_3236  binding-protein-dependent transport systems inner membrane component  47.29 
 
 
262 aa  228  7e-59  Jannaschia sp. CCS1  Bacteria  normal  0.0387101  normal  0.554966 
 
 
-
 
NC_012850  Rleg_1647  binding-protein-dependent transport systems inner membrane component  46.44 
 
 
262 aa  221  9e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.29435 
 
 
-
 
NC_008528  OEOE_1465  spermidine/putrescine ABC transporter permease protein  36.25 
 
 
262 aa  181  1e-44  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1923  binding-protein-dependent transport systems inner membrane component  44.63 
 
 
262 aa  179  4e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.438917 
 
 
-
 
NC_007494  RSP_3393  ABC opine/polyamine transporter, inner membrane subunit  36.33 
 
 
264 aa  156  4e-37  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.381224  n/a   
 
 
-
 
NC_009050  Rsph17029_3039  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
264 aa  156  4e-37  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.645477  normal 
 
 
-
 
NC_008254  Meso_3746  binding-protein-dependent transport systems inner membrane component  36.25 
 
 
268 aa  154  1e-36  Chelativorans sp. BNC1  Bacteria  normal  0.475602  n/a   
 
 
-
 
NC_009668  Oant_4153  binding-protein-dependent transport systems inner membrane component  35 
 
 
263 aa  153  2.9999999999999998e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.829399  n/a   
 
 
-
 
NC_011989  Avi_2708  ABC transporter membrane spanning protein (polyamine)  33.33 
 
 
264 aa  152  4e-36  Agrobacterium vitis S4  Bacteria  normal  0.319241  n/a   
 
 
-
 
NC_008688  Pden_5050  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
262 aa  149  5e-35  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2420  putative ABC spermidine/putrescine transporter permease protein  38.06 
 
 
281 aa  148  8e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.814446  normal 
 
 
-
 
NC_011982  Avi_8304  ABC transporter  32.24 
 
 
265 aa  147  2.0000000000000003e-34  Agrobacterium vitis S4  Bacteria  normal  0.0178234  n/a   
 
 
-
 
NC_008786  Veis_0203  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
265 aa  146  3e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.973641  normal  0.52762 
 
 
-
 
NC_009720  Xaut_0859  binding-protein-dependent transport systems inner membrane component  36.51 
 
 
268 aa  145  5e-34  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2705  spermidine/putrescine ABC transporter inner membrane protein  32.51 
 
 
265 aa  145  5e-34  Burkholderia xenovorans LB400  Bacteria  normal  0.628706  normal 
 
 
-
 
NC_004578  PSPTO_2522  ABC transporter, permease protein  33.33 
 
 
264 aa  144  2e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0756  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
264 aa  143  2e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.533361  normal 
 
 
-
 
NC_009485  BBta_7195  ABC transporter permease  34.55 
 
 
271 aa  141  9.999999999999999e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2333  binding-protein dependent transport system inner membrane protein  32.93 
 
 
264 aa  141  9.999999999999999e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.161709  normal  0.782854 
 
 
-
 
NC_007948  Bpro_4417  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
268 aa  140  1.9999999999999998e-32  Polaromonas sp. JS666  Bacteria  normal  0.303148  normal 
 
 
-
 
NC_010681  Bphyt_1894  binding-protein-dependent transport systems inner membrane component  32.1 
 
 
265 aa  140  1.9999999999999998e-32  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00977235  normal  0.387076 
 
 
-
 
NC_012791  Vapar_0306  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
264 aa  139  3.9999999999999997e-32  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6540  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
270 aa  139  3.9999999999999997e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.199847 
 
 
-
 
NC_007908  Rfer_0887  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
263 aa  139  3.9999999999999997e-32  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6628  binding-protein-dependent transport systems inner membrane component  30.61 
 
 
264 aa  139  4.999999999999999e-32  Burkholderia phymatum STM815  Bacteria  normal  0.381273  normal 
 
 
-
 
NC_010676  Bphyt_4429  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
264 aa  139  6e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.186422  normal  0.676109 
 
 
-
 
NC_007952  Bxe_B0748  polyamine/opine/phosphonate ABC transporter inner membrane protein  31.01 
 
 
264 aa  138  7.999999999999999e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.467059  normal 
 
 
-
 
NC_009485  BBta_1834  ABC transporter, permease protein  30.61 
 
 
269 aa  138  7.999999999999999e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.632575 
 
 
-
 
NC_010086  Bmul_5060  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
264 aa  137  1e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.183233 
 
 
-
 
NC_007948  Bpro_3945  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
264 aa  138  1e-31  Polaromonas sp. JS666  Bacteria  normal  0.334886  normal  0.870267 
 
 
-
 
NC_007953  Bxe_C1236  ABC spermidine/putrescine transporter, inner membrane subunit  34.98 
 
 
267 aa  138  1e-31  Burkholderia xenovorans LB400  Bacteria  normal  0.362839  normal 
 
 
-
 
NC_010322  PputGB1_3207  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
264 aa  138  1e-31  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_4437  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
264 aa  137  2e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2089  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
268 aa  136  3.0000000000000003e-31  Pseudomonas putida GB-1  Bacteria  normal  0.217099  normal 
 
 
-
 
NC_002947  PP_3816  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
269 aa  135  5e-31  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.0037178  normal  0.4746 
 
 
-
 
NC_008061  Bcen_4730  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
264 aa  135  5e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.293753  n/a   
 
 
-
 
NC_008543  Bcen2424_3633  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
264 aa  135  5e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.332864 
 
 
-
 
NC_009512  Pput_1953  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
268 aa  135  7.000000000000001e-31  Pseudomonas putida F1  Bacteria  normal  0.911704  normal 
 
 
-
 
NC_010552  BamMC406_3539  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
264 aa  135  9e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.447694  normal 
 
 
-
 
NC_008391  Bamb_5374  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
264 aa  134  9.999999999999999e-31  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.628457 
 
 
-
 
NC_009439  Pmen_3449  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
269 aa  133  3e-30  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.413551 
 
 
-
 
NC_010501  PputW619_1933  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
269 aa  132  5e-30  Pseudomonas putida W619  Bacteria  normal  normal  0.0161656 
 
 
-
 
NC_008786  Veis_4689  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
276 aa  132  5e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.363302  normal 
 
 
-
 
NC_009720  Xaut_0865  binding-protein-dependent transport systems inner membrane component  36.44 
 
 
264 aa  132  6.999999999999999e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2851  binding-protein-dependent transport systems inner membrane component  37.09 
 
 
273 aa  131  1.0000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.227272  n/a   
 
 
-
 
NC_007492  Pfl01_3243  binding-protein dependent transport system inner membrane protein  34.19 
 
 
269 aa  131  1.0000000000000001e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.796458 
 
 
-
 
NC_009485  BBta_0498  putative sperimidine/putrescine ABC transporter (permease protein)  35.32 
 
 
265 aa  130  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.986757  normal  0.371454 
 
 
-
 
NC_012853  Rleg_5506  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
267 aa  129  4.0000000000000003e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.673957  normal  0.0589597 
 
 
-
 
NC_009720  Xaut_2579  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
277 aa  129  4.0000000000000003e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  0.715101  normal 
 
 
-
 
NC_011982  Avi_8169  ABC transporter membrane spanning protein  38.46 
 
 
260 aa  128  7.000000000000001e-29  Agrobacterium vitis S4  Bacteria  normal  0.165008  n/a   
 
 
-
 
NC_007802  Jann_3073  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
284 aa  128  1.0000000000000001e-28  Jannaschia sp. CCS1  Bacteria  normal  0.446798  normal  0.0908777 
 
 
-
 
NC_010625  Bphy_6272  binding-protein-dependent transport systems inner membrane component  33.84 
 
 
280 aa  127  2.0000000000000002e-28  Burkholderia phymatum STM815  Bacteria  normal  0.596153  normal  0.412675 
 
 
-
 
NC_010511  M446_4679  binding-protein-dependent transport systems inner membrane component  36.03 
 
 
287 aa  127  2.0000000000000002e-28  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4377  binding-protein-dependent transport systems inner membrane component  30.52 
 
 
265 aa  127  2.0000000000000002e-28  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0786  binding-protein-dependent transport systems inner membrane component  35.92 
 
 
265 aa  126  4.0000000000000003e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2399  binding-protein dependent transport system inner membrane protein  34.68 
 
 
271 aa  126  4.0000000000000003e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.00651767  normal  0.388943 
 
 
-
 
NC_004578  PSPTO_2665  spermidine/putrescine ABC transporter, permease protein, putative  34.23 
 
 
271 aa  125  5e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0357719  n/a   
 
 
-
 
NC_007509  Bcep18194_C6717  ABC spermidine/putrescine transporter, inner membrane subunit  33.2 
 
 
280 aa  125  5e-28  Burkholderia sp. 383  Bacteria  decreased coverage  0.00799546  normal 
 
 
-
 
NC_009439  Pmen_4000  binding-protein-dependent transport systems inner membrane component  36.71 
 
 
275 aa  125  8.000000000000001e-28  Pseudomonas mendocina ymp  Bacteria  normal  0.360042  normal 
 
 
-
 
NC_010087  Bmul_6002  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
265 aa  124  2e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.176391  normal 
 
 
-
 
NC_010625  Bphy_7052  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
265 aa  123  3e-27  Burkholderia phymatum STM815  Bacteria  normal  normal  0.34418 
 
 
-
 
NC_008254  Meso_1862  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
272 aa  122  5e-27  Chelativorans sp. BNC1  Bacteria  normal  0.148364  n/a   
 
 
-
 
NC_010505  Mrad2831_1250  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
272 aa  122  5e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2541  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
272 aa  121  9e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  0.180027  n/a   
 
 
-
 
NC_012917  PC1_2228  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
272 aa  121  9e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3856  binding-protein-dependent transport systems inner membrane component  34.5 
 
 
270 aa  121  9e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3639  binding-protein-dependent transport systems inner membrane component  33.89 
 
 
268 aa  120  1.9999999999999998e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.344703 
 
 
-
 
NC_007952  Bxe_B1684  ABC spermidine/putrescine transporter, inner membrane subunit  33.08 
 
 
300 aa  120  3e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.396396 
 
 
-
 
NC_010676  Bphyt_4966  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
295 aa  119  3e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.102355  normal  0.118273 
 
 
-
 
NC_008781  Pnap_2859  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
286 aa  119  6e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.163733  normal  0.0234889 
 
 
-
 
NC_009485  BBta_6500  ABC transporter permease  32.37 
 
 
264 aa  119  7e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.537768  normal 
 
 
-
 
NC_014165  Tbis_1588  binding-protein-dependent transporter inner membrane component  39.07 
 
 
279 aa  118  7.999999999999999e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.148375 
 
 
-
 
NC_013510  Tcur_0448  binding-protein-dependent transport systems inner membrane component  36.8 
 
 
275 aa  118  9.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6247  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
266 aa  118  9.999999999999999e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.487966 
 
 
-
 
NC_010511  M446_4045  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
274 aa  117  1.9999999999999998e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.329946  normal 
 
 
-
 
NC_011982  Avi_8149  ABC transporter  32.1 
 
 
266 aa  117  1.9999999999999998e-25  Agrobacterium vitis S4  Bacteria  normal  0.828592  n/a   
 
 
-
 
NC_007492  Pfl01_5122  binding-protein dependent transport system inner membrane protein  36.07 
 
 
274 aa  116  3e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.026759  normal  0.638371 
 
 
-
 
NC_009049  Rsph17029_0830  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
265 aa  116  3e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.225733  normal 
 
 
-
 
NC_010159  YpAngola_A3109  spermidine/putrescine ABC transporter permease  32.89 
 
 
282 aa  116  3.9999999999999997e-25  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1338  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
282 aa  116  3.9999999999999997e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1221  spermidine/putrescine ABC transporter, permease protein  32.89 
 
 
282 aa  115  5e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2156  ABC transporter, inner membrane subunit  30.8 
 
 
265 aa  115  6e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0414  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
275 aa  115  8.999999999999998e-25  Pseudomonas putida KT2440  Bacteria  normal  0.958357  normal 
 
 
-
 
NC_010681  Bphyt_2374  binding-protein-dependent transport systems inner membrane component  34.24 
 
 
270 aa  115  8.999999999999998e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0750  ABC transporter permease  36.41 
 
 
276 aa  115  8.999999999999998e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2401  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
268 aa  114  1.0000000000000001e-24  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1871  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
278 aa  114  1.0000000000000001e-24  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_07900  putative permease of ABC transporter  36.41 
 
 
276 aa  114  1.0000000000000001e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00280578 
 
 
-
 
NC_009512  Pput_0448  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
275 aa  114  1.0000000000000001e-24  Pseudomonas putida F1  Bacteria  normal  normal  0.439073 
 
 
-
 
NC_010184  BcerKBAB4_1203  ornithine carbamoyltransferase  31.82 
 
 
266 aa  113  2.0000000000000002e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1105  polyamine ABC transporter, permease protein  32.19 
 
 
267 aa  113  3e-24  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4788  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
275 aa  113  3e-24  Pseudomonas putida W619  Bacteria  normal  normal  0.776443 
 
 
-
 
NC_012854  Rleg_6542  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
266 aa  113  3e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.208097 
 
 
-
 
NC_008254  Meso_2370  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
274 aa  113  3e-24  Chelativorans sp. BNC1  Bacteria  normal  0.560014  n/a   
 
 
-
 
NC_010322  PputGB1_0445  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
275 aa  113  3e-24  Pseudomonas putida GB-1  Bacteria  normal  normal  0.355956 
 
 
-
 
NC_008688  Pden_4946  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
264 aa  113  3e-24  Paracoccus denitrificans PD1222  Bacteria  normal  0.650523  normal 
 
 
-
 
NC_010483  TRQ2_1451  ornithine carbamoyltransferase  30.89 
 
 
256 aa  112  4.0000000000000004e-24  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
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