| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8169 |
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| Symbol | |
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| ID | 7365076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 117493 |
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| End bp | 118275 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641778 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002540075 |
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| Protein GI | 222080212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.165008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACCCATA TCTTAAGCCG CAGCCTCTTG GTCATTCTGT TCGGGCTGCT TTTGGCGCCG
CTCTTGCCCG CGATCGTGAT GTCATTCAGT GCCGACAACA ACCTTGCATT TCCACCTTCC
GGCTGGAGCT TTCGGTGGTA CTCGGCGGTT TTGAGCAATG AGCGATTTCT CGCGGGCCTG
AAACTTAGCG TGACGCTTGC GATCGCTGCG ACAATCCTGT CATTGGCATT CGGGGTCGCA
GCCTCCTACG CGCTGGTGCG TTCGAAGATC CCGTTTGCCA ATTCGCTCAT CGCGCTCTTC
ACGGCGCCGC TGATCGTACC CTCGATCATC TTGGGTCTTG GGCTTCTTCT GGTGTTCGTG
CAACTCAAGC TCAACGGATC GTACTTCGCG CTCGTCTTTA CCCATACCAT GATCGTGACA
CCCTTCGTTA TCCGGATATT GGTCACCGGT CTGCAGACGA TGCCTGCCGA CATTGAGTCG
GCCGCAGCGA GCCTCGGCGC AAGGCCGCTT ACGGTGTTTC GGCGGATTAC CTTGCCTACT
CTTACCCCTT CGATCACAGG TGCGGCCCTG CTGTCATTCC TCATCTCATT TGACGAGGTC
GCGATCACCT TGTTCCTGGC TGGACAGTCC CTGTCGACAC TACCGGTGGC AATCTATCGT
TACACGACTG AGCGAACCGA CCCACAGATC GCTGCGCTGT CGGTCCTCCT CATCCTCTTG
AGTGTCTCCC TCATGGTCCT GCTCGAACGG GTCATCGGGC TCGCTCGCGC AATCGGAAAA
TAA
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| Protein sequence | MTHILSRSLL VILFGLLLAP LLPAIVMSFS ADNNLAFPPS GWSFRWYSAV LSNERFLAGL
KLSVTLAIAA TILSLAFGVA ASYALVRSKI PFANSLIALF TAPLIVPSII LGLGLLLVFV
QLKLNGSYFA LVFTHTMIVT PFVIRILVTG LQTMPADIES AAASLGARPL TVFRRITLPT
LTPSITGAAL LSFLISFDEV AITLFLAGQS LSTLPVAIYR YTTERTDPQI AALSVLLILL
SVSLMVLLER VIGLARAIGK
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