More than 300 homologs were found in PanDaTox collection
for query gene Bcep18194_C6717 on replicon NC_007509
Organism: Burkholderia sp. 383



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007509  Bcep18194_C6717  ABC spermidine/putrescine transporter, inner membrane subunit  100 
 
 
280 aa  550  1e-156  Burkholderia sp. 383  Bacteria  decreased coverage  0.00799546  normal 
 
 
-
 
NC_010625  Bphy_6272  binding-protein-dependent transport systems inner membrane component  82.5 
 
 
280 aa  451  1.0000000000000001e-126  Burkholderia phymatum STM815  Bacteria  normal  0.596153  normal  0.412675 
 
 
-
 
NC_007952  Bxe_B1684  ABC spermidine/putrescine transporter, inner membrane subunit  80.73 
 
 
300 aa  435  1e-121  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.396396 
 
 
-
 
NC_010676  Bphyt_4966  binding-protein-dependent transport systems inner membrane component  80.73 
 
 
295 aa  429  1e-119  Burkholderia phytofirmans PsJN  Bacteria  normal  0.102355  normal  0.118273 
 
 
-
 
NC_007492  Pfl01_4467  binding-protein dependent transport system inner membrane protein  61.57 
 
 
282 aa  335  3.9999999999999995e-91  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.380773  normal  0.874975 
 
 
-
 
NC_007948  Bpro_2022  binding-protein-dependent transport systems inner membrane component  49.26 
 
 
299 aa  258  7e-68  Polaromonas sp. JS666  Bacteria  normal  normal  0.612103 
 
 
-
 
NC_013922  Nmag_0084  binding-protein-dependent transport systems inner membrane component  37.96 
 
 
272 aa  150  2e-35  Natrialba magadii ATCC 43099  Archaea  normal  0.0395984  n/a   
 
 
-
 
NC_009674  Bcer98_1009  ornithine carbamoyltransferase  33.77 
 
 
266 aa  139  6e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4689  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
276 aa  139  6e-32  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.363302  normal 
 
 
-
 
NC_009720  Xaut_0865  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
264 aa  138  8.999999999999999e-32  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3393  ABC opine/polyamine transporter, inner membrane subunit  33.33 
 
 
264 aa  137  2e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.381224  n/a   
 
 
-
 
NC_009708  YpsIP31758_1221  spermidine/putrescine ABC transporter, permease protein  39.21 
 
 
282 aa  137  2e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1338  binding-protein-dependent transport systems inner membrane component  39.21 
 
 
282 aa  137  2e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3039  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
264 aa  137  2e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.645477  normal 
 
 
-
 
NC_010159  YpAngola_A3109  spermidine/putrescine ABC transporter permease  39.21 
 
 
282 aa  137  2e-31  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012852  Rleg_6034  binding-protein-dependent transport systems inner membrane component  37 
 
 
259 aa  135  7.000000000000001e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.958438 
 
 
-
 
NC_009668  Oant_4153  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
263 aa  135  7.000000000000001e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.829399  n/a   
 
 
-
 
NC_010511  M446_3856  binding-protein-dependent transport systems inner membrane component  33.83 
 
 
270 aa  135  7.000000000000001e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1203  ornithine carbamoyltransferase  30.71 
 
 
266 aa  135  8e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013923  Nmag_3864  binding-protein-dependent transport systems inner membrane component  34.56 
 
 
279 aa  134  1.9999999999999998e-30  Natrialba magadii ATCC 43099  Archaea  normal  0.623194  n/a   
 
 
-
 
NC_011772  BCG9842_B4005  spermidine/putrescine ABC transporter, permease protein  32.46 
 
 
266 aa  133  3e-30  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000178374 
 
 
-
 
NC_011725  BCB4264_A1339  spermidine/putrescine ABC transporter, permease protein  32.46 
 
 
266 aa  133  3e-30  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2579  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
277 aa  132  3.9999999999999996e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  0.715101  normal 
 
 
-
 
NC_003909  BCE_1400  spermidine/putrescine ABC transporter, permease protein  31.58 
 
 
266 aa  132  5e-30  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1377  spermidine/putrescine ABC transporter, permease protein  31.58 
 
 
266 aa  132  5e-30  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000768374 
 
 
-
 
NC_005945  BAS1201  spermidine/putrescine ABC transporter permease  31.58 
 
 
266 aa  132  5e-30  Bacillus anthracis str. Sterne  Bacteria  normal  0.440242  n/a   
 
 
-
 
NC_005957  BT9727_1179  spermidine/putrescine ABC transporter, permease  31.58 
 
 
266 aa  132  5e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1181  spermidine/putrescine ABC transporter, permease  31.58 
 
 
266 aa  132  5e-30  Bacillus cereus E33L  Bacteria  normal  0.0752832  n/a   
 
 
-
 
NC_007530  GBAA_1299  spermidine/putrescine ABC transporter permease  31.58 
 
 
266 aa  132  5e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3449  binding-protein-dependent transport systems inner membrane component  37.18 
 
 
269 aa  131  1.0000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.413551 
 
 
-
 
NC_010086  Bmul_5060  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
264 aa  130  2.0000000000000002e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.183233 
 
 
-
 
NC_010552  BamMC406_3539  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
264 aa  130  2.0000000000000002e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  0.447694  normal 
 
 
-
 
NC_008391  Bamb_5374  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
264 aa  130  2.0000000000000002e-29  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.628457 
 
 
-
 
NC_009485  BBta_2420  putative ABC spermidine/putrescine transporter permease protein  34.6 
 
 
281 aa  130  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.814446  normal 
 
 
-
 
NC_007492  Pfl01_3243  binding-protein dependent transport system inner membrane protein  38.46 
 
 
269 aa  130  3e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.796458 
 
 
-
 
NC_007948  Bpro_4377  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
265 aa  129  6e-29  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4730  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
264 aa  128  8.000000000000001e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.293753  n/a   
 
 
-
 
NC_008543  Bcen2424_3633  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
264 aa  128  8.000000000000001e-29  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.332864 
 
 
-
 
NC_009439  Pmen_4000  binding-protein-dependent transport systems inner membrane component  35.5 
 
 
275 aa  128  1.0000000000000001e-28  Pseudomonas mendocina ymp  Bacteria  normal  0.360042  normal 
 
 
-
 
NC_010322  PputGB1_2089  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
268 aa  127  2.0000000000000002e-28  Pseudomonas putida GB-1  Bacteria  normal  0.217099  normal 
 
 
-
 
NC_002947  PP_3816  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
269 aa  127  3e-28  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.0037178  normal  0.4746 
 
 
-
 
NC_009512  Pput_1953  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
268 aa  127  3e-28  Pseudomonas putida F1  Bacteria  normal  0.911704  normal 
 
 
-
 
NC_013421  Pecwa_2541  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
272 aa  127  3e-28  Pectobacterium wasabiae WPP163  Bacteria  normal  0.180027  n/a   
 
 
-
 
NC_012917  PC1_2228  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
272 aa  126  4.0000000000000003e-28  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6540  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
270 aa  126  5e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.199847 
 
 
-
 
NC_002947  PP_0414  binding-protein-dependent transport systems inner membrane component  37.12 
 
 
275 aa  125  6e-28  Pseudomonas putida KT2440  Bacteria  normal  0.958357  normal 
 
 
-
 
NC_010322  PputGB1_0445  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
275 aa  125  8.000000000000001e-28  Pseudomonas putida GB-1  Bacteria  normal  normal  0.355956 
 
 
-
 
NC_007492  Pfl01_5122  binding-protein dependent transport system inner membrane protein  35.94 
 
 
274 aa  125  9e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.026759  normal  0.638371 
 
 
-
 
NC_007802  Jann_3236  binding-protein-dependent transport systems inner membrane component  32.11 
 
 
262 aa  125  9e-28  Jannaschia sp. CCS1  Bacteria  normal  0.0387101  normal  0.554966 
 
 
-
 
NC_009620  Smed_4607  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
259 aa  124  1e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1933  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
269 aa  125  1e-27  Pseudomonas putida W619  Bacteria  normal  normal  0.0161656 
 
 
-
 
NC_009720  Xaut_0859  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
268 aa  125  1e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0448  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
275 aa  125  1e-27  Pseudomonas putida F1  Bacteria  normal  normal  0.439073 
 
 
-
 
NC_011369  Rleg2_3161  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
259 aa  124  1e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1923  binding-protein-dependent transport systems inner membrane component  36.82 
 
 
262 aa  124  1e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.438917 
 
 
-
 
NC_008786  Veis_0786  binding-protein-dependent transport systems inner membrane component  37.86 
 
 
265 aa  125  1e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1871  binding-protein-dependent transport systems inner membrane component  36.12 
 
 
278 aa  124  1e-27  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3985  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
279 aa  124  2e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0828593 
 
 
-
 
NC_011988  Avi_5876  ABC transporter membrane spanning protein (spermidine/putrescine)  35.04 
 
 
281 aa  124  2e-27  Agrobacterium vitis S4  Bacteria  normal  0.413281  n/a   
 
 
-
 
NC_011729  PCC7424_3606  Ornithine carbamoyltransferase  31.42 
 
 
288 aa  124  2e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.129461 
 
 
-
 
NC_008261  CPF_1479  ABC transporter, permease protein  27.41 
 
 
260 aa  124  2e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0195961  n/a   
 
 
-
 
NC_008148  Rxyl_2915  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
267 aa  122  5e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0830  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
265 aa  122  8e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.225733  normal 
 
 
-
 
NC_009656  PSPA7_0750  ABC transporter permease  37.74 
 
 
276 aa  122  8e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0748  polyamine/opine/phosphonate ABC transporter inner membrane protein  33.07 
 
 
264 aa  122  8e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.467059  normal 
 
 
-
 
NC_011658  BCAH187_A1441  spermidine/putrescine ABC transporter, permease protein  32.02 
 
 
266 aa  122  8e-27  Bacillus cereus AH187  Bacteria  normal  0.0782345  n/a   
 
 
-
 
NC_013922  Nmag_0103  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
275 aa  122  9e-27  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010571  Oter_3799  ornithine carbamoyltransferase  32.68 
 
 
260 aa  121  9.999999999999999e-27  Opitutus terrae PB90-1  Bacteria  normal  normal  0.195582 
 
 
-
 
NC_007493  RSP_2156  ABC transporter, inner membrane subunit  33.33 
 
 
265 aa  121  9.999999999999999e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4429  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
264 aa  121  9.999999999999999e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.186422  normal  0.676109 
 
 
-
 
NC_004578  PSPTO_2522  ABC transporter, permease protein  30.83 
 
 
264 aa  120  1.9999999999999998e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2399  binding-protein dependent transport system inner membrane protein  35.35 
 
 
271 aa  120  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.00651767  normal  0.388943 
 
 
-
 
NC_011989  Avi_2708  ABC transporter membrane spanning protein (polyamine)  29.81 
 
 
264 aa  120  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  0.319241  n/a   
 
 
-
 
NC_007908  Rfer_0887  binding-protein-dependent transport systems inner membrane component  32.79 
 
 
263 aa  120  1.9999999999999998e-26  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011982  Avi_8149  ABC transporter  33.33 
 
 
266 aa  120  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  0.828592  n/a   
 
 
-
 
NC_010505  Mrad2831_3230  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
272 aa  121  1.9999999999999998e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6628  binding-protein-dependent transport systems inner membrane component  31.89 
 
 
264 aa  120  1.9999999999999998e-26  Burkholderia phymatum STM815  Bacteria  normal  0.381273  normal 
 
 
-
 
NC_008786  Veis_0756  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
264 aa  120  1.9999999999999998e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.533361  normal 
 
 
-
 
NC_010623  Bphy_4324  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
279 aa  119  3.9999999999999996e-26  Burkholderia phymatum STM815  Bacteria  normal  normal  0.644272 
 
 
-
 
NC_012853  Rleg_5506  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
267 aa  119  3.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.673957  normal  0.0589597 
 
 
-
 
NC_004578  PSPTO_2665  spermidine/putrescine ABC transporter, permease protein, putative  35.85 
 
 
271 aa  119  4.9999999999999996e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0357719  n/a   
 
 
-
 
NC_009485  BBta_7195  ABC transporter permease  30.2 
 
 
271 aa  119  4.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_07900  putative permease of ABC transporter  36.79 
 
 
276 aa  119  6e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00280578 
 
 
-
 
NC_007005  Psyr_2333  binding-protein dependent transport system inner membrane protein  30.43 
 
 
264 aa  119  7.999999999999999e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.161709  normal  0.782854 
 
 
-
 
NC_009621  Smed_6311  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
266 aa  118  9.999999999999999e-26  Sinorhizobium medicae WSM419  Bacteria  normal  0.103333  normal 
 
 
-
 
NC_007952  Bxe_B2930  spermidine/putrescine ABC transporter inner membrane protein  31.91 
 
 
279 aa  118  9.999999999999999e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4788  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
275 aa  118  9.999999999999999e-26  Pseudomonas putida W619  Bacteria  normal  normal  0.776443 
 
 
-
 
NC_012880  Dd703_1788  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
275 aa  117  9.999999999999999e-26  Dickeya dadantii Ech703  Bacteria  normal  0.0709875  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2359  putative polyamine ABC transporter, permease protein  32.3 
 
 
289 aa  117  1.9999999999999998e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2498  putative polyamine ABC transporter, permease protein  32.3 
 
 
289 aa  117  1.9999999999999998e-25  Burkholderia pseudomallei 668  Bacteria  normal  0.633965  n/a   
 
 
-
 
NC_010681  Bphyt_1894  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
265 aa  117  1.9999999999999998e-25  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00977235  normal  0.387076 
 
 
-
 
NC_009719  Plav_1549  ornithine carbamoyltransferase  32.48 
 
 
284 aa  117  1.9999999999999998e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.899373  normal 
 
 
-
 
NC_007435  BURPS1710b_A0812  polyamine ABC transporter, permease protein  32.3 
 
 
279 aa  117  3e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  0.610714  n/a   
 
 
-
 
NC_007643  Rru_A3012  binding-protein dependent transport system inner membrane protein  34.43 
 
 
267 aa  117  3e-25  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.343858  n/a   
 
 
-
 
NC_007952  Bxe_B2705  spermidine/putrescine ABC transporter inner membrane protein  31.69 
 
 
265 aa  117  3e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.628706  normal 
 
 
-
 
NC_004311  BRA1105  polyamine ABC transporter, permease protein  33.05 
 
 
267 aa  116  5e-25  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6885  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
279 aa  116  5e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.471707  normal  0.190136 
 
 
-
 
NC_009485  BBta_1834  ABC transporter, permease protein  31.89 
 
 
269 aa  115  6.9999999999999995e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.632575 
 
 
-
 
NC_012791  Vapar_0306  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
264 aa  115  7.999999999999999e-25  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3214  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
278 aa  115  8.999999999999998e-25  Nocardioides sp. JS614  Bacteria  normal  0.722828  n/a   
 
 
-
 
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