| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2089 |
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| Symbol | |
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| ID | 5869878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2342682 |
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| End bp | 2343488 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547214 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001668326 |
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| Protein GI | 167033095 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.217099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCTGT CTCCCAATGC CATGGGTCGC CCGCTGCGTA CGGGCCTGTA CCTGACCACC
GGGGTCATCG CGGCCTTCCT GCTGCTGCCG GTCGTGTTCA TCGTGCTGCT GTCGTTCGGC
TCGTCCCAGT GGCTGGTATT CCCGCCGCCA GGCTGGACCT TCAAGTGGTA CGGCCAGTTC
TTCTCCAACC CGGAGTGGAT GGACGCTGCG CTGGCCAGCC TGAAGGTGGC CGTGCTGACC
ACCCTCGCCG CCGTACTGCT GGGCCTGCCC AGCGCGTTCG CCCTGGTGCG TGGCCGCTTC
CCGGGCCGCG AACTGCTGTA CGGGCTGTTC ACCATGCCGA TGATCGTGCC GCTGGTGATC
ATTGCCGTGG CGGTGTATGC GCTGTTTCTC AAACTTGGCT ACACCGGCAC GCTGTTCGCC
TTCGTGGTCA GCCACGTGAT CGTCGCCCTG CCCTTTACCA TCATTTCCAT CATCAACTCG
CTGAAGCTGT TCGACCAGTC GATTGAAGAT GCCGCGGTGA TCTGCGGTGC CTCGCGCCTG
CAGGCGATCT TCAAGGTCAC CTTCCCGGCC ATCCGCCCCG GCATGATCGC CGGCGGCCTG
TTCGCCTTCC TGGTGTCGTG GGATGAAGTG GTGCTGAGCG TGATGATGGC CAGCCCCGAC
CTGCAGACCC TGCCGGTGAA GATGTGGACC ACCCTGCGCC AGGACCTCAG CCCGGTCATT
GCCGTGGCCT CGACCCTGCT GATCGGCCTG TCGCTGCTTG TCATGTTCAT TGCCGCCGCC
TTGCGCCGGC GCACCGAAAA CGCCTGA
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| Protein sequence | MLLSPNAMGR PLRTGLYLTT GVIAAFLLLP VVFIVLLSFG SSQWLVFPPP GWTFKWYGQF
FSNPEWMDAA LASLKVAVLT TLAAVLLGLP SAFALVRGRF PGRELLYGLF TMPMIVPLVI
IAVAVYALFL KLGYTGTLFA FVVSHVIVAL PFTIISIINS LKLFDQSIED AAVICGASRL
QAIFKVTFPA IRPGMIAGGL FAFLVSWDEV VLSVMMASPD LQTLPVKMWT TLRQDLSPVI
AVASTLLIGL SLLVMFIAAA LRRRTENA
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