| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2228 |
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| Symbol | |
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| ID | 8133172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2559795 |
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| End bp | 2560613 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865516 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003017803 |
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| Protein GI | 253688613 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACAGC AGGGTGAAGT AGTGATCCGT CTGTGGAATA CCTTCTTTAA TTTCTACGGG
GCGGCGATGC TGTTGTTTTT GATTGTCCCT GTGCTGGTGA TTGTTCCGCT TTCGTTTAAT
GCCGGTTCGT TTCTTAGCTA TCCGCTGACG GGGTTTTCCC TGCGCTGGTA TCGCGAGTTT
TTTAACTCCA GCGAGTGGCT GGGTGCACTG GGCAACAGTC TGCTGATTGC TCCGCTAGCG
ACGCTATTGG CGACGGTACT CGGCGTGTTG GCATCCGTCG GGCTGGTGCG CGGTGAGTTT
CGCGGTAAAT CGCTGGTGAT GGCGGTGCTG ATTTCACCGA TGATTGCACC GGTGGTGATT
GTCGCGGTAG GGATGTTTTT CTTCTTTGCC AAACTGTCGC TGTTGAACAG CTATCTGGGT
TTGGTATTGG CACATGCGAT GCTGGGCGTG CCGTTCGTGG TGATTACGGT CACGGCGGTA
TTGAAGAACT ACGATCACAA CCTGACGCGC GCTGCCGCGA GTCTAGGTGC TTCGCCGCTG
CTGGCTTTTC GCAAGGTGAC GTTTCCGCTA ATTGCACCCG GCGTGTTTTC TGGGGCGCTT
TTTGCCTTTG CGACGTCGTT TGATGAGGTG ATCGTCACGC TGTTCCTCGC CAGCCCGCGC
CAGCGTACGC TACCGCTACA GATGTTTGCC GGCATCCGCG AGAACCTCGA CCCGACGATC
GCCGCTGCCG CGACCATGAT GGTGGGTGCT GCGCTTATCC TGCTGATCGT GATGGAAATC
CTGCGCCGCC GCTCGGAGCG TTTACGGAGT GGGGGCTAA
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| Protein sequence | MRQQGEVVIR LWNTFFNFYG AAMLLFLIVP VLVIVPLSFN AGSFLSYPLT GFSLRWYREF
FNSSEWLGAL GNSLLIAPLA TLLATVLGVL ASVGLVRGEF RGKSLVMAVL ISPMIAPVVI
VAVGMFFFFA KLSLLNSYLG LVLAHAMLGV PFVVITVTAV LKNYDHNLTR AAASLGASPL
LAFRKVTFPL IAPGVFSGAL FAFATSFDEV IVTLFLASPR QRTLPLQMFA GIRENLDPTI
AAAATMMVGA ALILLIVMEI LRRRSERLRS GG
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