| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0448 |
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| Symbol | |
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| ID | 5194143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 517986 |
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| End bp | 518813 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640584892 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001265802 |
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| Protein GI | 148545700 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.439073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCC CATACATGTC GCCCGTGGAG CGGGTCTGGT TCTACAGCCT GCGTATTCTC
TGCGGCTTGA TCCTGCTGTT CCTGATCTTG CCAGTGCTGG TGATCGTGCC GCTGTCGTTC
AACAGTGGCA GCTTCCTGGT GTACCCGCTG CAGGGCTTCT CGCTGCAGTG GTATCACGAC
TTCTTCGGCT CGGCCGAATG GATGCGGGCG TTGAAAAACA GCATCATCGT TGCCCCAGCG
GCCACGGTGC TGGCCATGGT GTTCGGCACG TTGGCGGCCA TCGGCCTGAC CCGTGGCGAT
TTCCCCGGCA AGTCGCTGGT GATGGCGCTG GTGATCTCGC CCATGGTGGT GCCGGTAGTG
ATCATCGGGG TGGCCAGTTA CCTGTTCTTC GCCCCTCTGG GCATGGGCAA CAGTTTCACC
TCGCTGATTC TGGTGCATGC GGTACTGGGT GTGCCGTTCG TCATCATTAC CGTGTCGGCG
ACGCTACAGG GGTTCAACTA CAATCTGGTG CGTGCGGCGG CCAGCCTGGG AGCCTCGCCT
CTGCTGGCTT TCCGCCGGGT GACCCTGCCG CTGATCGCGC CCGGTGTCAT CTCGGGCGCC
CTGTTTGCCT TTGCCACCTC GTTTGACGAG GTGGTGGTGA CGCTGTTCCT CGCCGGACCG
GAACAGGCAA CTCTGCCGCG GCAGATGTTC AGTGGTATTC GCGAGAACCT GAGCCCGACC
ATTGCCGCGG CGGCGACCTT GCTGATTGCG TTCTCGGTGT TGTTGCTGCT GACCCTGGAA
TGGTTGCGTG GGCGTAGTGA GAAGCTGAGG ACTCAACAGC CGGCTTGA
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| Protein sequence | MLSPYMSPVE RVWFYSLRIL CGLILLFLIL PVLVIVPLSF NSGSFLVYPL QGFSLQWYHD
FFGSAEWMRA LKNSIIVAPA ATVLAMVFGT LAAIGLTRGD FPGKSLVMAL VISPMVVPVV
IIGVASYLFF APLGMGNSFT SLILVHAVLG VPFVIITVSA TLQGFNYNLV RAAASLGASP
LLAFRRVTLP LIAPGVISGA LFAFATSFDE VVVTLFLAGP EQATLPRQMF SGIRENLSPT
IAAAATLLIA FSVLLLLTLE WLRGRSEKLR TQQPA
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