Gene M446_4679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4679 
Symbol 
ID6133268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5151025 
End bp5151888 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content72% 
IMG OID641644824 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001771452 
Protein GI170742797 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG CATCCCTTTC CCCCGCCTCC GCCCCGGCCC TCGCCGCGAG GCCCGGCCTC 
TCGGTCCGGC TCGGCCGGGC GGCCTTCCTG GCCGCCGTCA TCCTGGCCTA CGCGGTCATC
TTCGCGCCGA TCGCCATGGT GATCGCGATC TCGTTCTTCG ACCAGGAGAT CGTCACCTTC
CCGCCCGACG CCCTGACCCT GCGCTGGTAC GTCAACGCCT GGGCCCAGCG CGACTTCGCG
CGCGGCTTCG CGACCTCGCT GGAGATCGCG CTCGCCGCGA CGGCGATCGG CGTGCCGCTG
GGCACCGCCG CCGCGCTGGC GCTGGTGCGG GGCAGGATCC CGGGGCGCGG CCTGATCAAC
ACCTTCCTGC TCGCGCCGCT CGCGGTGCCG GCGATCGTGG CGGGCTCGGC CCTCTACATG
TTCTACCTGC GGGCCGAGGA CTGGCTCGAC ATGGACATCA AGGCCACGTT CGGCGGCCTG
GTGGCGGCCA ACGTGCTGAT CACCATCCCG TGGACGGTGC GCCTCGTCGG CGCGAGCCTC
GCCGGCCTCG ACCGGGCGGC CGAGGAGGCG GCGGCGAATC TCGGCGCCCG GCCGCTCACG
GTGTTCCGCC GCATCACCCT GCCGATGCTG CGGCCCGGCA TCGTGGCCGC CTCCCTGTTC
TCCTTCGTGG CGAGTTTCGA GAATCTCGAA CTCAACCTGC TCCTCGTCGG GCCGGGCCGC
ACCACCCTGC CGGTCGCGAT GCTGAGCTAC CTGGAATTCC GCATGGACCC GACGCTGGCC
GCGGTCGCGA CCGCGCAGAT CGCCATGGTG ACGATCCTGA TGCTGGTCAC CGACCGCTTC
GTGAAGCTCT CCCGGGTGGT GTGA
 
Protein sequence
MSVASLSPAS APALAARPGL SVRLGRAAFL AAVILAYAVI FAPIAMVIAI SFFDQEIVTF 
PPDALTLRWY VNAWAQRDFA RGFATSLEIA LAATAIGVPL GTAAALALVR GRIPGRGLIN
TFLLAPLAVP AIVAGSALYM FYLRAEDWLD MDIKATFGGL VAANVLITIP WTVRLVGASL
AGLDRAAEEA AANLGARPLT VFRRITLPML RPGIVAASLF SFVASFENLE LNLLLVGPGR
TTLPVAMLSY LEFRMDPTLA AVATAQIAMV TILMLVTDRF VKLSRVV